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Nierman WC, Pain A, Anderson MJ, Wortman JR, Kim HS, Arroyo J, Berriman M, Abe K, Archer DB, Bermejo C, Bennett J, Bowyer P, Chen D, Collins M, Coulsen R, Davies R, Dyer PS, Farman M, Fedorova N, Fedorova N, Feldblyum TV, Fischer R, Fosker N, Fraser A, García JL, García MJ, Goble A, Goldman GH, Gomi K, Griffith-Jones S, Gwilliam R, Haas B, Haas H, Harris D, Horiuchi H, Huang J, Humphray S, Jiménez J, Keller N, Khouri H, Kitamoto K, Kobayashi T, Konzack S, Kulkarni R, Kumagai T, Lafon A, Lafton A, Latgé JP, Li W, Lord A, Lu C, Majoros WH, May GS, Miller BL, Mohamoud Y, Molina M, Monod M, Mouyna I, Mulligan S, Murphy L, O'Neil S, Paulsen I, Peñalva MA, Pertea M, Price C, Pritchard BL, Quail MA, Rabbinowitsch E, Rawlins N, Rajandream MA, Reichard U, Renauld H, Robson GD, Rodriguez de Córdoba S, Rodríguez-Peña JM, Ronning CM, Rutter S, Salzberg SL, Sanchez M, Sánchez-Ferrero JC, Saunders D, Seeger K, Squares R, Squares S, Takeuchi M, Tekaia F, Turner G, Vazquez de Aldana CR, Weidman J, White O, Woodward J, Yu JH, Fraser C, Galagan JE, Asai K, Machida M, Hall N, Barrell B, Denning DW

Genomic sequence of the pathogenic and allergenic filamentous fungus Aspergillus fumigatus, Nature. 2005-12-22

Barrett D, Klee W, Doherty M, Szenci O, Gentile A, Eddy R, da Silva JC

European College of Bovine Health Management, The Veterinary record. 2005-12-19

da Silva JC, Vespúcio MV, Dalio RB, Guimarães MA, Pinto AP, Garcia WN, Zucoloto S, Garcia SB

Hyperplasia of the colonic neuroendocrine cells after pinealectomy in rats. The new evidence for the existence of connections between the distant parts of the diffuse neuroendocrine system, Neuro endocrinology letters. 2005-12-16

Fraser-Liggett CM

Insights on biology and evolution from microbial genome sequencing, Genome research. 2005-12-12

Bertini AM, Silva JC, Taborda W, Becker F, Lemos Bebber FR, Zucco Viesi JM, Aquim G, Engel Ribeiro T

Perinatal outcomes and the use of oral hypoglycemic agents, Journal of perinatal medicine. 2005-12-01

Wu M, Ren Q, Durkin AS, Daugherty SC, Brinkac LM, Dodson RJ, Madupu R, Sullivan SA, Kolonay JF, Haft DH, Nelson WC, Tallon LJ, Jones KM, Ulrich LE, Gonzalez JM, Zhulin IB, Robb FT, Eisen JA

Life in hot carbon monoxide: the complete genome sequence of Carboxydothermus hydrogenoformans Z-2901, PLoS genetics. 2005-11-25

Fielding J, Georgiou-Karistianis N, Millist L, White O

Temporal variation in the control of goal-directed visuospatial attention in basal ganglia disorders, Neuroscience research. 2005-11-14

Haft DH, Selengut J, Mongodin EF, Nelson KE

A guild of 45 CRISPR-associated (Cas) protein families and multiple CRISPR/Cas subtypes exist in prokaryotic genomes, PLoS computational biology. 2005-11-11

Silva JC, Gorenstein MV, Li GZ, Vissers JP, Geromanos SJ

Absolute quantification of proteins by LCMSE: a virtue of parallel MS acquisition, Molecular & cellular proteomics : MCP. 2005-10-11

Mongodin EF, Emerson JB, Nelson KE

Microbial metagenomics, Genome biology. 2005-09-27

Medini D, Donati C, Tettelin H, Masignani V, Rappuoli R

The microbial pan-genome, Current opinion in genetics & development. 2005-09-26

Bishop R, Shah T, Pelle R, Hoyle D, Pearson T, Haines L, Brass A, Hulme H, Graham SP, Taracha EL, Kanga S, Lu C, Hass B, Wortman J, White O, Gardner MJ, Nene V, de Villiers EP

Analysis of the transcriptome of the protozoan Theileria parva using MPSS reveals that the majority of genes are transcriptionally active in the schizont stage, Nucleic acids research. 2005-09-25

Kuang H, Wei F, Marano MR, Wirtz U, Wang X, Liu J, Shum WP, Zaborsky J, Tallon LJ, Rensink W, Lobst S, Zhang P, Tornqvist CE, Tek A, Bamberg J, Helgeson J, Fry W, You F, Luo MC, Jiang J, Robin Buell C, Baker B

The R1 resistance gene cluster contains three groups of independently evolving, type I R1 homologues and shows substantial structural variation among haplotypes of Solanum demissum, The Plant journal : for cell and molecular biology. 2005-09-19

Tettelin H, Masignani V, Cieslewicz MJ, Donati C, Medini D, Ward NL, Angiuoli SV, Crabtree J, Jones AL, Durkin AS, Deboy RT, Davidsen TM, Mora M, Scarselli M, Margarit y Ros I, Peterson JD, Hauser CR, Sundaram JP, Nelson WC, Madupu R, Brinkac LM, Dodson RJ, Rosovitz MJ, Sullivan SA, Daugherty SC, Haft DH, Selengut J, Gwinn ML, Zhou L, Zafar N, Khouri H, Radune D, Dimitrov G, Watkins K, O'Connor KJ, Smith S, Utterback TR, White O, Rubens CE, Grandi G, Madoff LC, Kasper DL, Telford JL, Wessels MR, Rappuoli R, Fraser CM

Genome analysis of multiple pathogenic isolates of Streptococcus agalactiae: implications for the microbial "pan-genome", Proceedings of the National Academy of Sciences of the United States of America. 2005-09-19

Joardar V, Lindeberg M, Jackson RW, Selengut J, Dodson R, Brinkac LM, Daugherty SC, Deboy R, Durkin AS, Giglio MG, Madupu R, Nelson WC, Rosovitz MJ, Sullivan S, Crabtree J, Creasy T, Davidsen T, Haft DH, Zafar N, Zhou L, Halpin R, Holley T, Khouri H, Feldblyum T, White O, Fraser CM, Chatterjee AK, Cartinhour S, Schneider DJ, Mansfield J, Collmer A, Buell CR

Whole-genome sequence analysis of Pseudomonas syringae pv. phaseolicola 1448A reveals divergence among pathovars in genes involved in virulence and transposition, Journal of bacteriology. 2005-09-14

Fielding J, Georgiou-Karistianis N, Bradshaw J, Millist L, White O

No sequence dependent modulation of the Simon effect in Parkinson's disease, Brain research. Cognitive brain research. 2005-09-13

Barata RA, França-Silva JC, Mayrink W, Silva JC, Prata A, Lorosa ES, Fiúza JA, Gonçalves CM, Paula KM, Dias ES

[Aspects of the ecology and behaviour of phlebotomines in endemic area for visceral leishmaniasis in State of Minas Gerais], Revista da Sociedade Brasileira de Medicina Tropical. 2005-09-12

Fielding J, Georgiou-Karistianis N, Bradshaw J, Millist L, Churchyard A, White O

Accelerated time-course of inhibition of return in Huntington's disease, Behavioural brain research. 2005-09-08

Rasko DA, Mongodin EF

The first decade of microbial genomics: what have we learned and where are we going next?, Genome biology. 2005-08-30

Tanta KJ, Deitz JC, White O, Billingsley F

The effects of peer-play level on initiations and responses of preschool children with delayed play skills, The American journal of occupational therapy. : official publication of the American Occupational Therapy Association. 2005-08-29

Buell CR, Yuan Q, Ouyang S, Liu J, Zhu W, Wang A, Maiti R, Haas B, Wortman J, Pertea M, Jones KM, Kim M, Overton L, Tsitrin T, Fadrosh D, Bera J, Weaver B, Jin S, Johri S, Reardon M, Webb K, Hill J, Moffat K, Tallon L, Van Aken S, Lewis M, Utterback T, Feldblyum T, Zismann V, Iobst S, Hsiao J, de Vazeille AR, Salzberg SL, White O, Fraser C, Yu Y, Kim H, Rambo T, Currie J, Collura K, Kernodle-Thompson S, Wei F, Kudrna K, Ammiraju JS, Luo M, Goicoechea JL, Wing RA, Henry D, Oates R, Palmer M, Pries G, Saski C, Simmons J, Soderlund C, Nelson W, de la Bastide M, Spiegel L, Nascimento L, Huang E, Preston R, Zutavern T, Palmer L, O'Shaughnessy A, Dike S, McCombie WR, Minx P, Cordum H, Wilson R, Jin W, Lee HR, Jiang J, Jackson S,

Sequence, annotation, and analysis of synteny between rice chromosome 3 and diverged grass species, Genome research. 2005-08-18

Kannan N, Neuwald AF

Did protein kinase regulatory mechanisms evolve through elaboration of a simple structural component?, Journal of molecular biology. 2005-08-15

Richard ML, Nobile CJ, Bruno VM, Mitchell AP

Candida albicans biofilm-defective mutants, Eukaryotic cell. 2005-08-09

Labruna MB, Jorge RS, Sana DA, Jácomo AT, Kashivakura CK, Furtado MM, Ferro C, Perez SA, Silveira L, Santos TS, Marques SR, Morato RG, Nava A, Adania CH, Teixeira RH, Gomes AA, Conforti VA, Azevedo FC, Prada CS, Silva JC, Batista AF, Marvulo MF, Morato RL, Alho CJ, Pinter A, Ferreira PM, Ferreira F, Barros-Battesti DM

Ticks (Acari: Ixodida) on wild carnivores in Brazil, Experimental & applied acarology. 2005-08-08

Neuwald AF

Evolutionary clues to eukaryotic DNA clamp-loading mechanisms: analysis of the functional constraints imposed on replication factor C AAA+ ATPases, Nucleic acids research. 2005-08-05

Gwinn MR, Whipkey DL, Tennant LB, Weston A

Differential gene expression in normal human mammary epithelial cells treated with malathion monitored by DNA microarrays, Environmental health perspectives. 2005-08-04

Pongo Aguila L, Carrión R, Luna W, Silva JC, Limburg H

[Cataract blindness in people 50 years old or older in a semirural area of northern Peru], Revista panamericana de salud pública = Pan American journal of public health. 2005-08-01

Bressler SB, Silva JC, Bressler NM, Alexander J, Green WR

Clinicopathologic correlation of occult choroidal neovascularization in age-related macular degeneration. 1992, Retina (Philadelphia, Pa.). 2005-07-28

Bressler NM, Silva JC, Bressler SB, Fine SL, Green WR

Clinicopathologic correlation of drusen and retinal pigment epithelial abnormalities in age-related macular degeneration. 1994, Retina (Philadelphia, Pa.). 2005-07-28

Berriman M, Ghedin E, Hertz-Fowler C, Blandin G, Renauld H, Bartholomeu DC, Lennard NJ, Caler E, Hamlin NE, Haas B, Böhme U, Hannick L, Aslett MA, Shallom J, Marcello L, Hou L, Wickstead B, Alsmark UC, Arrowsmith C, Atkin RJ, Barron AJ, Bringaud F, Brooks K, Carrington M, Cherevach I, Chillingworth TJ, Churcher C, Clark LN, Corton CH, Cronin A, Davies RM, Doggett J, Djikeng A, Feldblyum T, Field MC, Fraser A, Goodhead I, Hance Z, Harper D, Harris BR, Hauser H, Hostetler J, Ivens A, Jagels K, Johnson D, Johnson J, Jones K, Kerhornou AX, Koo H, Larke N, Landfear S, Larkin C, Leech V, Line A, Lord A, Macleod A, Mooney PJ, Moule S, Martin DM, Morgan GW, Mungall K, Norbertczak H, Ormond D, Pai G, Peacock CS, Peterson J, Quail MA, Rabbinowitsch E, Rajandream MA, Reitter C, Salzberg SL, Sanders M, Schobel S, Sharp S, Simmonds M, Simpson AJ, Tallon L, Turner CM, Tait A, Tivey AR, Van Aken S, Walker D, Wanless D, Wang S, White B, White O, Whitehead S, Woodward J, Wortman J, Adams MD, Embley TM, Gull K, Ullu E, Barry JD, Fairlamb AH, Opperdoes F, Barrell BG, Donelson JE, Hall N, Fraser CM, Melville SE, El-Sayed NM

The genome of the African trypanosome Trypanosoma brucei, Science (New York, N.Y.). 2005-07-15

El-Sayed NM, Myler PJ, Bartholomeu DC, Nilsson D, Aggarwal G, Tran AN, Ghedin E, Worthey EA, Delcher AL, Blandin G, Westenberger SJ, Caler E, Cerqueira GC, Branche C, Haas B, Anupama A, Arner E, Aslund L, Attipoe P, Bontempi E, Bringaud F, Burton P, Cadag E, Campbell DA, Carrington M, Crabtree J, Darban H, da Silveira JF, de Jong P, Edwards K, Englund PT, Fazelina G, Feldblyum T, Ferella M, Frasch AC, Gull K, Horn D, Hou L, Huang Y, Kindlund E, Klingbeil M, Kluge S, Koo H, Lacerda D, Levin MJ, Lorenzi H, Louie T, Machado CR, McCulloch R, McKenna A, Mizuno Y, Mottram JC, Nelson S, Ochaya S, Osoegawa K, Pai G, Parsons M, Pentony M, Pettersson U, Pop M, Ramirez JL, Rinta J, Robertson L, Salzberg SL, Sanchez DO, Seyler A, Sharma R, Shetty J, Simpson AJ, Sisk E, Tammi MT, Tarleton R, Teixeira S, Van Aken S, Vogt C, Ward PN, Wickstead B, Wortman J, White O, Fraser CM, Stuart KD, Andersson B

The genome sequence of Trypanosoma cruzi, etiologic agent of Chagas disease, Science (New York, N.Y.). 2005-07-15

El-Sayed NM, Myler PJ, Blandin G, Berriman M, Crabtree J, Aggarwal G, Caler E, Renauld H, Worthey EA, Hertz-Fowler C, Ghedin E, Peacock C, Bartholomeu DC, Haas BJ, Tran AN, Wortman JR, Alsmark UC, Angiuoli S, Anupama A, Badger J, Bringaud F, Cadag E, Carlton JM, Cerqueira GC, Creasy T, Delcher AL, Djikeng A, Embley TM, Hauser C, Ivens AC, Kummerfeld SK, Pereira-Leal JB, Nilsson D, Peterson J, Salzberg SL, Shallom J, Silva JC, Sundaram J, Westenberger S, White O, Melville SE, Donelson JE, Andersson B, Stuart KD, Hall N

Comparative genomics of trypanosomatid parasitic protozoa, Science (New York, N.Y.). 2005-07-15

França-Silva JC, Barata RA, Costa RT, Monteiro EM, Machado-Coelho GL, Vieira EP, Prata A, Mayrink W, Nascimento E, Fortes-Dias CL, da Silva JC, Dias ES

Importance of Lutzomyia longipalpis in the dynamics of transmission of canine visceral leishmaniasis in the endemic area of Porteirinha Municipality, Minas Gerais, Brazil, Veterinary parasitology. 2005-07-11

Mongodin EF, Hance IR, Deboy RT, Gill SR, Daugherty S, Huber R, Fraser CM, Stetter K, Nelson KE

Gene transfer and genome plasticity in Thermotoga maritima, a model hyperthermophilic species, Journal of bacteriology. 2005-07-04

Maione D, Margarit I, Rinaudo CD, Masignani V, Mora M, Scarselli M, Tettelin H, Brettoni C, Iacobini ET, Rosini R, D'Agostino N, Miorin L, Buccato S, Mariani M, Galli G, Nogarotto R, Nardi Dei V, Vegni F, Fraser C, Mancuso G, Teti G, Madoff LC, Paoletti LC, Rappuoli R, Kasper DL, Telford JL, Grandi G

Identification of a universal Group B streptococcus vaccine by multiple genome screen, Science (New York, N.Y.). 2005-07-04

Gardner MJ, Bishop R, Shah T, de Villiers EP, Carlton JM, Hall N, Ren Q, Paulsen IT, Pain A, Berriman M, Wilson RJ, Sato S, Ralph SA, Mann DJ, Xiong Z, Shallom SJ, Weidman J, Jiang L, Lynn J, Weaver B, Shoaibi A, Domingo AR, Wasawo D, Crabtree J, Wortman JR, Haas B, Angiuoli SV, Creasy TH, Lu C, Suh B, Silva JC, Utterback TR, Feldblyum TV, Pertea M, Allen J, Nierman WC, Taracha EL, Salzberg SL, White OR, Fitzhugh HA, Morzaria S, Venter JC, Fraser CM, Nene V

Genome sequence of Theileria parva, a bovine pathogen that transforms lymphocytes, Science (New York, N.Y.). 2005-07-04

Paulsen IT, Press CM, Ravel J, Kobayashi DY, Myers GS, Mavrodi DV, DeBoy RT, Seshadri R, Ren Q, Madupu R, Dodson RJ, Durkin AS, Brinkac LM, Daugherty SC, Sullivan SA, Rosovitz MJ, Gwinn ML, Zhou L, Schneider DJ, Cartinhour SW, Nelson WC, Weidman J, Watkins K, Tran K, Khouri H, Pierson EA, Pierson LS, Thomashow LS, Loper JE

Complete genome sequence of the plant commensal Pseudomonas fluorescens Pf-5, Nature biotechnology. 2005-06-26

Salzberg SL, Dunning Hotopp JC, Delcher AL, Pop M, Smith DR, Eisen MB, Nelson WC

Correction: Serendipitous discovery of Wolbachia genomes in multiple Drosophila species, Genome biology. 2005-06-24

Cunha MS, da Silva JC, Nakamoto HA, Ferreira MC

Study of warm ischemia followed by reperfusion on a lower limb model in rats: effect of allopurinol and streptokinase, Clinics (São Paulo, Brazil). 2005-06-13

Ferdinands MD, Seneviratne J, White O

Visual deterioration in hyperemesis gravidarum, The Medical journal of Australia. 2005-06-07

Gwinn MM, Derby KM, Fisher W, Kurtz P, Fahs A, Augustine M, McLaughlin TF

Effects of increased response effort and reinforcer delay on choice and aberrant behavior, Behavior modification. 2005-05-24

Francisco Neto A, Silva JC, Fagundes DJ, Percário S, Novo NF, Juliano Y, Moreira Neto AA

[Oxidative alterations, total antioxidant status and nitric oxide study in rats submitted to ischemia and reperfusion of hind limbs], Acta cirúrgica brasileira / Sociedade Brasileira para Desenvolvimento Pesquisa em Cirurgia. 2005-05-11

Schmidt EW, Nelson JT, Rasko DA, Sudek S, Eisen JA, Haygood MG, Ravel J

Patellamide A and C biosynthesis by a microcin-like pathway in Prochloron didemni, the cyanobacterial symbiont of Lissoclinum patella, Proceedings of the National Academy of Sciences of the United States of America. 2005-05-09

Budowle B, Schutzer SE, Ascher MS, Atlas RM, Burans JP, Chakraborty R, Dunn JJ, Fraser CM, Franz DR, Leighton TJ, Morse SA, Murch RS, Ravel J, Rock DL, Slezak TR, Velsko SP, Walsh AC, Walters RA

Toward a system of microbial forensics: from sample collection to interpretation of evidence, Applied and environmental microbiology. 2005-05-04

Khoury MJ, Davis R, Gwinn M, Lindegren ML, Yoon P

Do we need genomic research for the prevention of common diseases with environmental causes?, American journal of epidemiology. 2005-04-20

Bruno VM, Mitchell AP

Regulation of azole drug susceptibility by Candida albicans protein kinase CK2, Molecular microbiology. 2005-04-07

Rasko DA, Altherr MR, Han CS, Ravel J

Genomics of the Bacillus cereus group of organisms, FEMS microbiology reviews. 2005-04-05

Ayele M, Haas BJ, Kumar N, Wu H, Xiao Y, Van Aken S, Utterback TR, Wortman JR, White OR, Town CD

Whole genome shotgun sequencing of Brassica oleracea and its application to gene discovery and annotation in Arabidopsis, Genome research. 2005-04-04

Silva JC, Denny R, Dorschel CA, Gorenstein M, Kass IJ, Li GZ, McKenna T, Nold MJ, Richardson K, Young P, Geromanos S

Quantitative proteomic analysis by accurate mass retention time pairs, Analytical chemistry. 2005-04-01

Couto E, Barini R, Zaccaria R, Annicchino-Bizzacchi JM, Passini Junior R, Pereira BG, Silva JC, Pinto e Silva JL

Association of anticardiolipin antibody and C677T in methylenetetrahydrofolate reductase mutation in women with recurrent spontaneous abortions: a new path to thrombophilia?, São Paulo medical journal = Revista paulista de medicina. 2005-03-31

Monteiro EM, da Silva JC, da Costa RT, Costa DC, Barata RA, de Paula EV, Machado-Coelho GL, Rocha MF, Fortes-Dias CL, Dias ES

[Visceral leishmaniasis: a study on phlebotomine sand flies and canine infection in Montes Claros, State of Minas Gerais], Revista da Sociedade Brasileira de Medicina Tropical. 2005-03-30

Haas BJ, Wortman JR, Ronning CM, Hannick LI, Smith RK, Maiti R, Chan AP, Yu C, Farzad M, Wu D, White O, Town CD

Complete reannotation of the Arabidopsis genome: methods, tools, protocols and the final release, BMC biology. 2005-03-22

Gill SR, Fouts DE, Archer GL, Mongodin EF, Deboy RT, Ravel J, Paulsen IT, Kolonay JF, Brinkac L, Beanan M, Dodson RJ, Daugherty SC, Madupu R, Angiuoli SV, Durkin AS, Haft DH, Vamathevan J, Khouri H, Utterback T, Lee C, Dimitrov G, Jiang L, Qin H, Weidman J, Tran K, Kang K, Hance IR, Nelson KE, Fraser CM

Insights on evolution of virulence and resistance from the complete genome analysis of an early methicillin-resistant Staphylococcus aureus strain and a biofilm-producing methicillin-resistant Staphylococcus epidermidis strain, Journal of bacteriology. 2005-03-18

Sun X, Frierson HF, Chen C, Li C, Ran Q, Otto KB, Cantarel BL, Cantarel BM, Vessella RL, Gao AC, Petros J, Miura Y, Simons JW, Dong JT

Frequent somatic mutations of the transcription factor ATBF1 in human prostate cancer, Nature genetics. 2005-03-06

Ravel J, Fraser CM

Genomics at the genus scale, Trends in microbiology. 2005-03-01

Little J, Sharp L, Khoury MJ, Bradley L, Gwinn M

The epidemiologic approach to pharmacogenomics, American journal of pharmacogenomics : genomics-related research in drug development and clinical practice. 2005-02-24

Salzberg SL, Dunning Hotopp JC, Delcher AL, Pop M, Smith DR, Eisen MB, Nelson WC

Serendipitous discovery of Wolbachia genomes in multiple Drosophila species, Genome biology. 2005-02-22

Stekler J, Bachmann L, Brotman RM, Erbelding EJ, Lloyd LV, Rietmeijer CA, Handsfield HH, Holmes KK, Golden MR

Concurrent sexually transmitted infections (STIs) in sex partners of patients with selected STIs: implications for patient-delivered partner therapy, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America. 2005-02-21

Prust C, Hoffmeister M, Liesegang H, Wiezer A, Fricke WF, Ehrenreich A, Gottschalk G, Deppenmeier U

Complete genome sequence of the acetic acid bacterium Gluconobacter oxydans, Nature biotechnology. 2005-01-23

Pugedo H, Barata RA, França-Silva JC, Silva JC, Dias ES

[HP: an improved model of suction light trap for the capture of small insects], Revista da Sociedade Brasileira de Medicina Tropical. 2005-01-18

Rasko DA, Myers GS, Ravel J

Visualization of comparative genomic analyses by BLAST score ratio, BMC bioinformatics. 2005-01-05

Fouts DE, Mongodin EF, Mandrell RE, Miller WG, Rasko DA, Ravel J, Brinkac LM, DeBoy RT, Parker CT, Daugherty SC, Dodson RJ, Durkin AS, Madupu R, Sullivan SA, Shetty JU, Ayodeji MA, Shvartsbeyn A, Schatz MC, Badger JH, Fraser CM, Nelson KE

Major structural differences and novel potential virulence mechanisms from the genomes of multiple campylobacter species, PLoS biology. 2005-01-04

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