Publications - Publications 2021

Hanna DA, Moore CM, Liu L, Yuan X, Dominic IM, Fleischhacker AS, Hamza I, Ragsdale SW, Reddi AR

Heme oxygenase-2 (HO-2) binds and buffers labile ferric heme in human embryonic kidney cells, The Journal of biological chemistry. 2021 Dec 29

Bateman NW, Tarney CM, Abulez TS, Hood BL, Conrads KA, Zhou M, Soltis AR, Teng PN, Jackson A, Tian C, Dalgard CL, Wilkerson MD, Kessler MD, Goecker Z, Loffredo J, Shriver CD, Hu H, Cote M, Parker GJ, Segars J, Al-Hendy A, Risinger JI, Phippen NT, Casablanca Y, Darcy KM, Maxwell GL, Conrads TP, O'Connor TD

Peptide ancestry informative markers in uterine neoplasms from women of European, African, and Asian ancestry, iScience. 2021 Dec 23

Zhao Q, Yuan Y, Zhang J, Li J, Li W, Guo K, Wang Y, Chen J, Yan W, Wang B, Jing N, Ma B, Zhang Q

Early predictors of severe COVID-19 among hospitalized patients, Journal of clinical laboratory analysis. 2021 Dec 23

Park SB, Tamburin S, Schenone A, Kleckner IR, Velasco R, Alberti P, Kanzawa-Lee G, Lustberg M, Dorsey SG, Mantovani E, Hamedani M, Argyriou AA, Cavaletti G, Hoke A,

Optimal outcome measures for assessing exercise and rehabilitation approaches in chemotherapy-induced peripheral-neurotoxicity: Systematic review and consensus expert opinion, Expert review of neurotherapeutics. 2021 Dec 12

Borgogna JC, Anastario M, Firemoon P, Rink E, Ricker A, Ravel J, Brotman RM, Yeoman CJ

Vaginal microbiota of American Indian women and associations with measures of psychosocial stress, PloS one. 2021 Dec 10

Starkweather A, Ward K, Eze B, Gavin A, Renn CL, Dorsey SG

Neurophysiological and transcriptomic predictors of chronic low back pain: Study protocol for a longitudinal inception cohort study, Research in nursing & health. 2021 Dec 05

Piacentino D, Grant-Beurmann S, Vizioli C, Li X, Moore CF, Ruiz-Rodado V, Lee MR, Joseph PV, Fraser CM, Weerts EM, Leggio L

Gut microbiome and metabolome in a non-human primate model of chronic excessive alcohol drinking, Translational psychiatry. 2021 Dec 01

Stucke EM, Dara A, Dwivedi A, Hodges TK, Ott S, Coulibaly D, Koné AK, Traoré K, Guindo B, Tangara BM, Niangaly A, Daou M, Diarra I, Tolo Y, Sissoko M, Tallon LJ, Sadzewicz L, Zhou AE, Laurens MB, Ouattara A, Kouriba B, Doumbo OK, Takala-Harrison S, Serre D, Plowe CV, Thera MA, Travassos MA, Silva JC

Successful Profiling of Plasmodium falciparum Gene Expression in Clinical Samples via a Custom Capture Array, mSystems. 2021 Nov 30

Aghdam N, Lischalk JW, Marin MP, Hall C, O'Connor T, Campbell L, Suy S, Collins SP, Margolis M, Krochmal R, Anderson E, Collins BT

Lobar Gross Endobronchial Disease Predicts for Overall Survival and Grade 5 Pulmonary Toxicity in Medically Inoperable Early Stage Non-Small Cell Lung Cancer Patients Treated With Stereotactic Body Radiation Therapy, Frontiers in oncology. 2021 Nov 29

Gerson KD, Liao J, McCarthy C, Burris HH, Korem T, Levy M, Ravel J, Elovitz MA

A non-optimal cervicovaginal microbiota in pregnancy is associated with a distinct metabolomic signature among non-Hispanic Black individuals, Scientific reports. 2021 Nov 23

Wilkes TC, Lewis T, Paget M, Holm J, Brager N, Bulloch A, Macmaster F, Molodynski A, Bhugra D

Wellbeing and mental health amongst medical students in Canada, The International journal of social psychiatry. 2021 Nov 18

Ma Y, Wang G, Gao F, Ma B, Song Q, Zhong S, Liu Y, Hong Y

Clinical utility of 3D magnetic resonance elastography in patients with biliary obstruction, European radiology. 2021 Nov 17

Mirzayi C, Renson A, , , Zohra F, Elsafoury S, Geistlinger L, Kasselman LJ, Eckenrode K, van de Wijgert J, Loughman A, Marques FZ, MacIntyre DA, Arumugam M, Azhar R, Beghini F, Bergstrom K, Bhatt A, Bisanz JE, Braun J, Bravo HC, Buck GA, Bushman F, Casero D, Clarke G, Collado MC, Cotter PD, Cryan JF, Demmer RT, Devkota S, Elinav E, Escobar JS, Fettweis J, Finn RD, Fodor AA, Forslund S, Franke A, Furlanello C, Gilbert J, Grice E, Haibe-Kains B, Handley S, Herd P, Holmes S, Jacobs JP, Karstens L, Knight R, Knights D, Koren O, Kwon DS, Langille M, Lindsay B, McGovern D, McHardy AC, McWeeney S, Mueller NT, Nezi L, Olm M, Palm N, Pasolli E, Raes J, Redinbo MR, Rühlemann M, Balfour Sartor R, Schloss PD, Schriml L, Segal E, Shardell M, Sharpton T, Smirnova E, Sokol H, Sonnenburg JL, Srinivasan S, Thingholm LB, Turnbaugh PJ, Upadhyay V, Walls RL, Wilmes P, Yamada T, Zeller G, Zhang M, Zhao N, Zhao L, Bao W, Culhane A, Devanarayan V, Dopazo J, Fan X, Fischer M, Jones W, Kusko R, Mason CE, Mercer TR, Sansone SA, Scherer A, Shi L, Thakkar S, Tong W, Wolfinger R, Hunter C, Segata N, Huttenhower C, Dowd JB, Jones HE, Waldron L

Reporting guidelines for human microbiome research: the STORMS checklist, Nature medicine. 2021 Nov 17

Wang W, Clough M, White O, Shuey N, Van Der Walt A, Fielding J

Detecting Cognitive Impairment in Idiopathic Intracranial Hypertension Using Ocular Motor and Neuropsychological Testing, Frontiers in neurology. 2021 Nov 16

Wang B, Dong W, Ma L, Dong Y, Wang S, Yuan Y, Ma Q, Xu J, Yan W, Nan J, Zhang Q, Xu W, Ma B, Chu Y, Zhang J, Li L, Li Y

Prevalence and Genetic Diversity of Isolates in Hospitalized Diarrheal Patients from Central China, Infection and drug resistance. 2021 Nov 15

Chuang NT, Gardner EJ, Terry DM, Crabtree J, Mahurkar AA, Rivell GL, Hong CC, Perry JA, Devine SE

Mutagenesis of human genomes by endogenous mobile elements on a population scale, Genome research. 2021 Nov 12

Shuster B, Casserly R, Lipford E, Olszewski R, Milon B, Viechweg S, Davidson K, Enoch J, McMurray M, Rutherford MA, Ohlemiller KK, Hoa M, Depireux DA, Mong JA, Hertzano R

Estradiol Protects against Noise-Induced Hearing Loss and Modulates Auditory Physiology in Female Mice, International journal of molecular sciences. 2021 Nov 11

Pickler RH, Dorsey SG

Shifting Paradigms in Nursing Science, Nursing research. 2021 Nov 10

Schriml LM, Munro JB, Schor M, Olley D, McCracken C, Felix V, Baron JA, Jackson R, Bello SM, Bearer C, Lichenstein R, Bisordi K, Dialo NC, Giglio M, Greene C

The Human Disease Ontology 2022 update, Nucleic acids research. 2021 Nov 10

Udagawa T, Atkinson PJ, Milon B, Abitbol JM, Song Y, Sperber M, Huarcaya Najarro E, Scheibinger M, Elkon R, Hertzano R, Cheng AG

Lineage-tracing and translatomic analysis of damage-inducible mitotic cochlear progenitors identifies candidate genes regulating regeneration, PLoS biology. 2021 Nov 10

Pressler SJ, Jung M, Gradus-Pizlo I, Titler M, Smith D, Gao S, Lake KR, Burney H, Clark D, Wierenga K, Dorsey SG, Giordani B

Randomized Controlled Trial of a Cognitive Intervention to Improve Memory in Heart Failure, Journal of cardiac failure. 2021 Nov 08

Kamle S, Ma B, He CH, Akosman B, Zhou Y, Lee CM, El-Deiry WS, Huntington K, Liang O, Machan JT, Kang MJ, Shin HJ, Mizoguchi E, Lee CG, Elias JA

Chitinase 3-like-1 is a therapeutic target that mediates the effects of aging in COVID-19, JCI insight. 2021 Nov 08

Jašarević E, Hill EM, Kane PJ, Rutt L, Gyles T, Folts L, Rock KD, Howard CD, Morrison KE, Ravel J, Bale TL

The composition of human vaginal microbiota transferred at birth affects offspring health in a mouse model, Nature communications. 2021 Nov 01

Ma W, Ma H, Qiu P, Zhang H, Yang Z, Ma B, Chang J, Shi X, Wu C

Sprayable β-FeSi composite hydrogel for portable skin tumor treatment and wound healing, Biomaterials. 2021 Oct 28

Andrade Pessoa Morales J, Marconi C, El-Zein M, Ravel J, da Silva Pinto GV, Silveira R, de Lima MD, de Carvalho NS, Figueiredo Alves RR, de Lima Parada CMG, Morais Leite SH, Villa LL, Franco EL, Guimarães da Silva M

Vaginal microbiome components as correlates of cervical human papillomavirus infection, The Journal of infectious diseases. 2021 Oct 28

Mattick J, Libro S, Bromley R, Chaicumpa W, Chung M, Cook D, Khan MB, Kumar N, Lau YL, Misra-Bhattacharya S, Rao R, Sadzewicz L, Saeung A, Shahab M, Sparklin BC, Steven A, Turner JD, Tallon LJ, Taylor MJ, Moorhead AR, Michalski M, Foster JM, Dunning Hotopp JC

X-treme loss of sequence diversity linked to neo-X chromosomes in filarial nematodes, PLoS neglected tropical diseases. 2021 Oct 27

Liu QX, Su ZP, Liu HH, Lu SP, Zhao Y, Ma B, Hou YM, Shi ZH

Current understanding and perspectives on the potential mechanisms of immune priming in beetles, Developmental and comparative immunology. 2021 Oct 27

Cavaletti G, Marmiroli P, Renn CL, Dorsey SG, Serra MP, Quartu M, Meregalli C

Cannabinoids: an Effective Treatment for Chemotherapy-Induced Peripheral Neurotoxicity?, Neurotherapeutics : the journal of the American Society for Experimental NeuroTherapeutics. 2021 Oct 19

Brooks CJ, Chan YM, Fielding J, White OB, Badcock DR, McKendrick AM

Visual contrast perception in visual snow syndrome reveals abnormal neural gain but not neural noise, Brain : a journal of neurology. 2021 Oct 11

Wu J, Danko D, Afshinnekoo E, Bezdan D, Bhattacharyya M, Castro-Nallar E, Chmielarczyk A, Hazrin-Chong NH, Deng Y, Dias-Neto E, Frolova A, Mason-Buck G, Iraola G, Jang S, Łabaj P, Lee PKH, Nieto-Caballero M, Osuolale OO, Ouzounis CA, Perlin MH, Prithiviraj B, Rascovan N, Różańska A, Schriml LM, Semmler T, Suzuki H, Ugalde JA, Young B, Werner J, Zambrano MM, Zhao Y, Mason C, Shi T,

Annotating unknown species of urban microorganisms on a global scale unveils novel functional diversity and local environment association, Environmental research. 2021 Oct 09

Strålin K, Wahlström E, Walther S, Bennet-Bark AM, Heurgren M, Lindén T, Holm J, Hanberger H

Mortality in hospitalized COVID-19 patients was associated with the COVID-19 admission rate during the first year of the pandemic in Sweden, Infectious diseases (London, England). 2021 Oct 06

Yao Z, Liu H, Xie F, Fischer S, Adkins RS, Aldridge AI, Ament SA, Bartlett A, Behrens MM, Van den Berge K, Bertagnolli D, de Bézieux HR, Biancalani T, Booeshaghi AS, Bravo HC, Casper T, Colantuoni C, Crabtree J, Creasy H, Crichton K, Crow M, Dee N, Dougherty EL, Doyle WI, Dudoit S, Fang R, Felix V, Fong O, Giglio M, Goldy J, Hawrylycz M, Herb BR, Hertzano R, Hou X, Hu Q, Kancherla J, Kroll M, Lathia K, Li YE, Lucero JD, Luo C, Mahurkar A, McMillen D, Nadaf NM, Nery JR, Nguyen TN, Niu SY, Ntranos V, Orvis J, Osteen JK, Pham T, Pinto-Duarte A, Poirion O, Preissl S, Purdom E, Rimorin C, Risso D, Rivkin AC, Smith K, Street K, Sulc J, Svensson V, Tieu M, Torkelson A, Tung H, Vaishnav ED, Vanderburg CR, van Velthoven C, Wang X, White OR, Huang ZJ, Kharchenko PV, Pachter L, Ngai J, Regev A, Tasic B, Welch JD, Gillis J, Macosko EZ, Ren B, Ecker JR, Zeng H, Mukamel EA

A transcriptomic and epigenomic cell atlas of the mouse primary motor cortex, Nature. 2021 Oct 06

Bakken TE, Jorstad NL, Hu Q, Lake BB, Tian W, Kalmbach BE, Crow M, Hodge RD, Krienen FM, Sorensen SA, Eggermont J, Yao Z, Aevermann BD, Aldridge AI, Bartlett A, Bertagnolli D, Casper T, Castanon RG, Crichton K, Daigle TL, Dalley R, Dee N, Dembrow N, Diep D, Ding SL, Dong W, Fang R, Fischer S, Goldman M, Goldy J, Graybuck LT, Herb BR, Hou X, Kancherla J, Kroll M, Lathia K, van Lew B, Li YE, Liu CS, Liu H, Lucero JD, Mahurkar A, McMillen D, Miller JA, Moussa M, Nery JR, Nicovich PR, Niu SY, Orvis J, Osteen JK, Owen S, Palmer CR, Pham T, Plongthongkum N, Poirion O, Reed NM, Rimorin C, Rivkin A, Romanow WJ, Sedeño-Cortés AE, Siletti K, Somasundaram S, Sulc J, Tieu M, Torkelson A, Tung H, Wang X, Xie F, Yanny AM, Zhang R, Ament SA, Behrens MM, Bravo HC, Chun J, Dobin A, Gillis J, Hertzano R, Hof PR, Höllt T, Horwitz GD, Keene CD, Kharchenko PV, Ko AL, Lelieveldt BP, Luo C, Mukamel EA, Pinto-Duarte A, Preissl S, Regev A, Ren B, Scheuermann RH, Smith K, Spain WJ, White OR, Koch C, Hawrylycz M, Tasic B, Macosko EZ, McCarroll SA, Ting JT, Zeng H, Zhang K, Feng G, Ecker JR, Linnarsson S, Lein ES

Comparative cellular analysis of motor cortex in human, marmoset and mouse, Nature. 2021 Oct 06

Ziffra RS, Kim CN, Ross JM, Wilfert A, Turner TN, Haeussler M, Casella AM, Przytycki PF, Keough KC, Shin D, Bogdanoff D, Kreimer A, Pollard KS, Ament SA, Eichler EE, Ahituv N, Nowakowski TJ

Single-cell epigenomics reveals mechanisms of human cortical development, Nature. 2021 Oct 06

Duan L, Wang C, Zhang W, Ma B, Deng Y, Li W, Zhao D

Interfacial Assembly and Applications of Functional Mesoporous Materials, Chemical reviews. 2021 Oct 05

Blevins D, Seneviratne C, Wang XQ, Johnson BA, Ait-Daoud N

A randomized, double-blind, placebo-controlled trial of ondansetron for the treatment of cocaine use disorder with post hoc pharmacogenetic analysis, Drug and alcohol dependence. 2021 Sep 24

Orwig DL, Abraham DS, Hochberg MC, Gruber-Baldini A, Guralnik JM, Cappola AR, Golden J, Hicks GE, Miller RR, Resnick B, Shardell M, Sterling RS, Bajracharya R, Magaziner J

Sex Differences in Recovery Across Multiple Domains among Older Adults with Hip Fracture, The journals of gerontology. Series A, Biological sciences and medical sciences. 2021 Sep 23

Solanki HS, Raja R, Zhavoronkov A, Ozerov IV, Artemov AV, Advani J, Radhakrishnan A, Babu N, Puttamallesh VN, Syed N, Nanjappa V, Subbannayya T, Sahasrabuddhe NA, Patil AH, Prasad TSK, Gaykalova D, Chang X, Sathyendran R, Mathur PP, Rangarajan A, Sidransky D, Pandey A, Izumchenko E, Gowda H, Chatterjee A

Correction: Targeting focal adhesion kinase overcomes erlotinib resistance in smoke induced lung cancer by altering phosphorylation of epidermal growth factor receptor, Oncoscience. 2021 Sep 23

Guimarães Alves AC, Sukow NM, Adelman Cipolla G, Mendes M, Leal TP, Petzl-Erler ML, Lehtonen Rodrigues Souza R, Rainha de Souza I, Sanchez C, Santolalla M, Loesch D, Dean M, Machado M, Moon JY, Kaplan R, North KE, Weiss S, Barreto ML, Lima-Costa MF, Guio H, Cáceres O, Padilla C, Tarazona-Santos E, Mata IF, Dieguez E, Raggio V, Lescano A, Tumas V, Borges V, Ferraz HB, Rieder CR, Schumacher-Schuh A, Santos-Lobato BL, Chana-Cuevas P, Fernandez W, Arboleda G, Arboleda H, Arboleda-Bustos CE, O'Connor TD, Beltrame MH, Borda V

Tracing the Distribution of European Lactase Persistence Genotypes Along the Americas, Frontiers in genetics. 2021 Sep 22

Tuddenham S, Stennett CA, Cone RA, Ravel J, Macintyre AN, Ghanem KG, He X, Brotman RM

Vaginal cytokine profile and microbiota before and after lubricant use compared with condomless vaginal sex: a preliminary observational study, BMC infectious diseases. 2021 Sep 18

Foletta PJ, Clough M, McKendrick AM, Solly EJ, White OB, Fielding J

Delayed Onset of Inhibition of Return in Visual Snow Syndrome, Frontiers in neurology. 2021 Sep 17

Break TJ, Oikonomou V, Dutzan N, Desai JV, Swidergall M, Freiwald T, Chauss D, Harrison OJ, Alejo J, Williams DW, Pittaluga S, Lee CR, Bouladoux N, Swamydas M, Hoffman KW, Greenwell-Wild T, Bruno VM, Rosen LB, Lwin W, Renteria A, Pontejo SM, Shannon JP, Myles IA, Olbrich P, Ferré EMN, Schmitt M, Martin D, , Barber DL, Solis NV, Notarangelo LD, Serreze DV, Matsumoto M, Hickman HD, Murphy PM, Anderson MS, Lim JK, Holland SM, Filler SG, Afzali B, Belkaid Y, Moutsopoulos NM, Lionakis MS

Response to Comments on "Aberrant type 1 immunity drives susceptibility to mucosal fungal infections", Science (New York, N.Y.). 2021 Sep 16

Wang X, Liu Y, Zhang M, Zhai D, Wang Y, Zhuang H, Ma B, Qu Y, Yu X, Ma J, Ma H, Yao Q, Wu C

3D Printing of Black Bioceramic Scaffolds with Micro/Nanostructure for Bone Tumor-Induced Tissue Therapy, Advanced healthcare materials. 2021 Sep 15

Symons GF, Clough M, Mutimer S, Major BP, O'Brien WT, Costello D, McDonald SJ, Chen Z, White O, Mychasiuk R, Law M, Wright DK, O'Brien TJ, Fielding J, Kolbe SC, Shultz SR

Cognitive ocular motor deficits and white matter damage chronically after sports-related concussion, Brain communications. 2021 Sep 14

Mtshali A, San JE, Osman F, Garrett N, Balle C, Giandhari J, Onywera H, Mngomezulu K, Mzobe G, de Oliveira T, Rompalo A, Mindel A, Abdool Karim SS, Ravel J, Passmore JS, Abdool Karim Q, Jaspan HB, Liebenberg LJP, Ngcapu S

Temporal Changes in Vaginal Microbiota and Genital Tract Cytokines Among South African Women Treated for Bacterial Vaginosis, Frontiers in immunology. 2021 Sep 14

Wang Y, Chan E, Dorsey SG, Campbell CM, Colloca L

Who are the placebo responders? A cross-sectional cohort study for psychological determinants, Pain. 2021 Sep 10

Novak J, Ravel J, Ma B, Ferreira CST, Tristão ADR, Silva MG, Marconi C

Characteristics associated with -dominated vaginal microbiota, Sexually transmitted infections. 2021 Sep 08

Ganguly P, Madonsela L, Chao JT, Loewen CJR, O'Connor TP, Verheyen EM, Allan DW

A scalable Drosophila assay for clinical interpretation of human PTEN variants in suppression of PI3K/AKT induced cellular proliferation, PLoS genetics. 2021 Sep 07

Shi X, Wang X, Neuwald AF, Halakivi-Clarke L, Clarke R, Xuan J

A Bayesian approach for accurate de novo transcriptome assembly, Scientific reports. 2021 Sep 03

Buffenstein R, Amoroso V, Andziak B, Avdieiev S, Azpurua J, Barker AJ, Bennett NC, Brieño-Enríquez MA, Bronner GN, Coen C, Delaney MA, Dengler-Crish CM, Edrey YH, Faulkes CG, Frankel D, Friedlander G, Gibney PA, Gorbunova V, Hine C, Holmes MM, Jarvis JUM, Kawamura Y, Kutsukake N, Kenyon C, Khaled WT, Kikusui T, Kissil J, Lagestee S, Larson J, Lauer A, Lavrenchenko LA, Lee A, Levitt JB, Lewin GR, Lewis Hardell KN, Lin TD, Mason MJ, McCloskey D, McMahon M, Miura K, Mogi K, Narayan V, O'Connor TP, Okanoya K, O'Riain MJ, Park TJ, Place NJ, Podshivalova K, Pamenter ME, Pyott SJ, Reznick J, Ruby JG, Salmon AB, Santos-Sacchi J, Sarko DK, Seluanov A, Shepard A, Smith M, Storey KB, Tian X, Vice EN, Viltard M, Watarai A, Wywial E, Yamakawa M, Zemlemerova ED, Zions M, Smith ESJ

The naked truth: a comprehensive clarification and classification of current 'myths' in naked mole-rat biology, Biological reviews of the Cambridge Philosophical Society. 2021 Sep 03

Feder KA, Patel A, Vepachedu VR, Dominguez C, Keller EN, Klein L, Kim C, Blood T, Hyun J, Williams TW, Feldman KA, Mostafa HH, Morris CP, Ravel J, Duwell M, Blythe D, Myers R

Association of E484K spike protein mutation with SARS-CoV-2 infection in vaccinated persons---Maryland, January - May 2021, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America. 2021 Sep 02

Neal B, Wu Y, Feng X, Zhang R, Zhang Y, Shi J, Zhang J, Tian M, Huang L, Li Z, Yu Y, Zhao Y, Zhou B, Sun J, Liu Y, Yin X, Hao Z, Yu J, Li KC, Zhang X, Duan P, Wang F, Ma B, Shi W, Di Tanna GL, Stepien S, Shan S, Pearson SA, Li N, Yan LL, Labarthe D, Elliott P

Effect of Salt Substitution on Cardiovascular Events and Death, The New England journal of medicine. 2021 Aug 29

Luo Z, Ma Y, Di T, Ma B, Li H, An J, Wang Y, Zhang H

DNMT3B decreases extracellular matrix degradation and alleviates intervertebral disc degeneration through TRPA1 methylation to inhibit the COX2/YAP axis, Aging. 2021 Aug 24

Merenstein D, Fraser CM, Roberts RF, Liu T, Grant-Beurmann S, Tan TP, Smith KH, Cronin T, Martin OA, Sanders ME, Lucan SC, Kane MA

subsp. BB-12 Protects against Antibiotic-Induced Functional and Compositional Changes in Human Fecal Microbiome, Nutrients. 2021 Aug 17

Kirk JM, Magaziner J, Shardell MD, Ryan AS, Gruber-Baldini AL, Orwig D, Hochberg MC, Rathbun AM

Depressive symptom heterogeneity among older adults after hip fracture, Age and ageing. 2021 Aug 16

Seplyarskiy VB, Soldatov RA, Koch E, McGinty RJ, Goldmann JM, Hernandez RD, Barnes K, Correa A, Burchard EG, Ellinor PT, McGarvey ST, Mitchell BD, Vasan RS, Redline S, Silverman E, Weiss ST, Arnett DK, Blangero J, Boerwinkle E, He J, Montgomery C, Rao DC, Rotter JI, Taylor KD, Brody JA, Chen YI, de Las Fuentes L, Hwu CM, Rich SS, Manichaikul AW, Mychaleckyj JC, Palmer ND, Smith JA, Kardia SLR, Peyser PA, Bielak LF, O'Connor TD, Emery LS, , , Gilissen C, Wong WSW, Kharchenko PV, Sunyaev S

Population sequencing data reveal a compendium of mutational processes in the human germ line, Science (New York, N.Y.). 2021 Aug 12

Shi Y, Qi YF, Lan GY, Wu Q, Ma B, Zhang XY, Ji RY, Ma YJ, Hong Y

Three-dimensional MR Elastography Depicts Liver Inflammation, Fibrosis, and Portal Hypertension in Chronic Hepatitis B or C, Radiology. 2021 Aug 10

O'Connor TK, Sandoval MC, Wang J, Hans JC, Takenaka R, Vi MC, Whiteman NK

Ecological basis and genetic architecture of crypsis polymorphism in the desert clicker grasshopper (Ligurotettix coquilletti), Evolution; international journal of organic evolution. 2021 Aug 09

Tvedte ES, Michalski J, Cheng S, Patkus RS, Tallon LJ, Sadzewicz L, Bruno VM, Silva JC, Rasko DA, Dunning Hotopp JC

Evaluation of a high-throughput, cost-effective Illumina library preparation kit, Scientific reports. 2021 Aug 05

Weintraub E, Seneviratne C, Anane J, Coble K, Magidson J, Kattakuzhy S, Greenblatt A, Welsh C, Pappas A, Ross TL, Belcher AM

Mobile Telemedicine for Buprenorphine Treatment in Rural Populations With Opioid Use Disorder, JAMA network open. 2021 Aug 02

Zhuang H, Qin C, Zhang M, Ma J, Zhai D, Ma B, Ma N, Huan Z, Wu C

3D-printed bioceramic scaffolds with FeSmicroflowers for magnetothermal and chemodynamic therapy of bone tumor and regeneration of bone defects, Biofabrication. 2021 Aug 02

Resnick B, Galik E, Kolanowski A, VanHaitsma K, Boltz M, Zhu S, Ellis J, Behrens L, Eshraghi K, Renn C, Dorsey SG

The Relationship Between Pain, Function, Behavioral, and Psychological Symptoms of Dementia and Quality of Life, Pain management nursing : official journal of the American Society of Pain Management Nurses. 2021 Aug 02

Solly EJ, Clough M, Foletta P, White OB, Fielding J

The Psychiatric Symptomology of Visual Snow Syndrome, Frontiers in neurology. 2021 Jul 30

Ma B, Ran R, Liao HY, Zhang HH

The paradoxical role of matrix metalloproteinase-11 in cancer, Biomedicine & pharmacotherapy = Biomedecine & pharmacotherapie. 2021 Jul 30

El Hage J, Gravitt P, Ravel J, Lahrichi N, Gralla E

Supporting scale-up of COVID-19 RT-PCR testing processes with discrete event simulation, PloS one. 2021 Jul 29

Yang C, Hallmark B, Chai JC, O'Connor TD, Reynolds LM, Wood AC, Seeds M, Chen YI, Steffen LM, Tsai MY, Kaplan RC, Daviglus ML, Mandarino LJ, Fretts AM, Lemaitre RN, Coletta DK, Blomquist SA, Johnstone LM, Tontsch C, Qi Q, Ruczinski I, Rich SS, Mathias RA, Chilton FH, Manichaikul A

Impact of Amerind ancestry and FADS genetic variation on omega-3 deficiency and cardiometabolic traits in Hispanic populations, Communications biology. 2021 Jul 28

Dai Z, Lou X, Shen T, Sun Y, Xiao Y, Zheng X, Wang X, Peng Y, Guo Y, Guo Y, Wen J, Fang H, Ma B, Xia Z

Combination of ablative fractional carbon dioxide laser and platelet-rich plasma treatment to improve hypertrophic scars: a retrospective clinical observational study, Burns & trauma. 2021 Jul 28

Ashing KT, Song G, O'Connor T, Obodo U, Abuan F, Dawson CT, Tiep B, Macalintal J, Yeung S, Xie B, Tsou MH

Spatial and Descriptive Analysis of Smoke and Vape Shop Locations Focusing on A Cancer Center Neighboring Catchment Area, Papers in applied geography. 2021 Jul 23

Chen X, Neuwald AF, Hilakivi-Clarke L, Clarke R, Xuan J

ChIP-GSM: Inferring active transcription factor modules to predict functional regulatory elements, PLoS computational biology. 2021 Jul 22

Cannon MV, Bogale HN, Bhalerao D, Keita K, Camara D, Barry Y, Keita M, Coulibaly D, Kone AK, Doumbo OK, Thera MA, Plowe CV, Travassos MA, Irish SR, Yeroshefsky J, Dorothy J, Prendergast B, St Laurent B, Fritz ML, Serre D

High-throughput detection of eukaryotic parasites and arboviruses in mosquitoes, Biology open. 2021 Jul 19

Garofano K, Park CS, Alarcon C, Avitia J, Barbour A, Diemert D, Fraser CM, Friedman PN, Horvath A, Rashid K, Shaazuddin M, Sidahmed A, O'Brien TJ, Perera MA, Lee NH

Differences in the platelet mRNA landscape portend racial disparities in platelet function and suggest novel therapeutic targets, Clinical pharmacology and therapeutics. 2021 Jul 13

Loesch DP, Horimoto ARVR, Heilbron K, Sarihan EI, Inca-Martinez M, Mason E, Cornejo-Olivas M, Torres L, Mazzetti P, Cosentino C, Sarapura-Castro E, Rivera-Valdivia A, Medina AC, Dieguez E, Raggio V, Lescano A, Tumas V, Borges V, Ferraz HB, Rieder CR, Schumacher-Schuh A, Santos-Lobato BL, Velez-Pardo C, Jimenez-Del-Rio M, Lopera F, Moreno S, Chana-Cuevas P, Fernandez W, Arboleda G, Arboleda H, Arboleda-Bustos CE, Yearout D, Zabetian CP, , Cannon P, Thornton TA, O'Connor TD, Mata IF,

Characterizing the Genetic Architecture of Parkinson's Disease in Latinos, Annals of neurology. 2021 Jul 06

Li Z, Bruno VM, Kim KS

CNS-infecting pathogens and exploit the host Pdlim2 for intracellular traversal and exocytosis in the blood-brain barrier, Infection and immunity. 2021 Jul 06

Lin J, Yang X, Kosters W, Xu T, Jia Y, Wang S, Zhu Q, Ryan M, Guo L, Zhang C, Lee C, Devine SE, Eichler EE, Ye K,

Mako: A Graph-based Pattern Growth Approach to Detect Complex Structural Variants, Genomics, proteomics & bioinformatics. 2021 Jul 02

Holm J, Frumento P, Almondo G, Gémes K, Bottai M, Alexanderson K, Friberg E, Farrants K

Predicting the duration of sickness absence due to knee osteoarthritis: a prognostic model developed in a population-based cohort in Sweden, BMC musculoskeletal disorders. 2021 Jul 02

Liu QX, Su ZP, Liu HH, Lu SP, Ma B, Zhao Y, Hou YM, Shi ZH

The Effect of Gut Bacteria on the Physiology of Red Palm Weevil, Olivier and Their Potential for the Control of This Pest, Insects. 2021 Jun 30

Brown SE, Robinson CK, Shardell MD, Holm JB, Ravel J, Ghanem KG, Brotman RM

Assessing the Concordance Between Urogenital and Vaginal Microbiota: Can Urine Specimens Be Used as a Proxy for Vaginal Samples?, Frontiers in cellular and infection microbiology. 2021 Jun 29

Soliman MA, Khan A, O'Connor TE, Foley K, Pollina J

Accuracy and Efficiency of Fusion Robotics™ Versus Mazor-X™ in Single-Level Lumbar Pedicle Screw Placement, Cureus. 2021 Jun 26

Orvis J, Gottfried B, Kancherla J, Adkins RS, Song Y, Dror AA, Olley D, Rose K, Chrysostomou E, Kelly MC, Milon B, Matern MS, Azaiez H, Herb B, Colantuoni C, Carter RL, Ament SA, Kelley MW, White O, Bravo HC, Mahurkar A, Hertzano R

gEAR: Gene Expression Analysis Resource portal for community-driven, multi-omic data exploration, Nature methods. 2021 Jun 25

Cawthon PM, Patel SM, Kritchevsky SB, Newman AB, Santanasto A, Kiel DP, Travison TG, Lane N, Cummings SR, Orwoll ES, Kwok T, Hirani V, Schousboe J, Karlsson MK, Mellström D, Ohlsson C, Ljunggren Ö, Xue QL, Shardell M, Jordan JM, Pencina KM, Fielding RA, Magaziner J, Correa-de-Araujo R, Bhasin S, Manini TM

What cut-point in gait speed best discriminates community dwelling older adults with mobility complaints from those without? A pooled analysis from the Sarcopenia Definitions and Outcomes Consortium, The journals of gerontology. Series A, Biological sciences and medical sciences. 2021 Jun 24

Gordijn P, O'Connor T

Multidecadal effects of fire in a grassland biodiversity hotspot: does pyrodiversity enhance plant diversity?, Ecological applications : a publication of the Ecological Society of America. 2021 Jun 23

Cannon MV, Bogale HN, Bhalerao D, Keita K, Camara D, Barry Y, Keita M, Coulibaly D, Kone AK, Doumbo OK, Thera MA, Plowe CV, Travassos MA, Irish SR, Yeroshefsky J, Dorothy J, Prendergast B, Laurent BS, Fritz ML, Serre D

High-throughput Detection of Eukaryotic Parasites and Arboviruses in Mosquitoes, Biology open. 2021 Jun 22

Martin OA, Grant-Beurmann S, Orellana ER, Hajnal A, Fraser CM

Changes in the Gut Microbiota Following Bariatric Surgery Are Associated with Increased Alcohol Intake in a Female Rat Model, Alcohol and alcoholism (Oxford, Oxfordshire). 2021 Jun 21

Saul-McBeth J, Dillon J, Lee A, Launder D, Kratch JM, Abutaha E, Williamson AA, Schroering AG, Michalski G, Biswas P, Conti SR, Shetty AC, McCracken C, Bruno VM, Parsai EI, Conti HR

Tissue Damage in Radiation-Induced Oral Mucositis Is Mitigated by IL-17 Receptor Signaling, Frontiers in immunology. 2021 Jun 17

Sikorski MJ, Hazen TH, Vyas G, Michalski JM, Rasko DA

Draft Genome Sequences of Two Enteroinvasive Escherichia coli Strains Representative of Major Enteroinvasive Clades, Microbiology resource announcements. 2021 Jun 10

Roghmann MC, Lydecker AD, Shardell M, DeBoy RT, Johnson JK, Zhao L, Hittle LL, Mongodin EF

Effect of mupirocin for Staphylococcus aureus decolonization on the microbiome of the nose and throat in community and nursing home dwelling adults, PloS one. 2021 Jun 08

Jin J, Tang T, Zhou H, Hong XD, Fan H, Zhang XD, Chen ZL, Ma B, Zhu SH, Guang-Yi W, Xia ZF

Synergistic Effects of Quercetin-modified Silicone Gel Sheet in Scar Treatment, Journal of burn care & research : official publication of the American Burn Association. 2021 Jun 05

Alberti P, Bernasconi DP, Cornblath DR, Jose Merkies IS, Park SB, Velasco R, Bruna J, Psimaras D, Susanne K, Pace A, Dorsey SG, Argyriou AA, Kalofonos HP, Briani C, Schenone A, Faber CG, Mazzeo A, Grisold W, Valsecchi M, Cavaletti G,

Prospective Evaluation of Health Care Provider and Patient Assessments in Chemotherapy Induced Peripheral Neurotoxicity, Neurology. 2021 Jun 02

Meeker TJ, Schmid AC, Liu Y, Keaser ML, Dorsey SG, Seminowicz DA, Greenspan JD

During Capsaicin-induced Central Sensitization Brush Allodynia is Associated with Baseline Warmth Sensitivity, Whereas Mechanical Hyperalgesia is Associated with Painful Mechanical Sensibility, Anxiety and Somatization, European journal of pain (London, England). 2021 May 29

Li G, Wubshet AK, Ding Y, Li Q, Dai J, Wang Y, Hou Q, Chen J, Ma B, Szczotka-Bochniarz A, Szathmary S, Zhang Y, Zhang J

Antigenicity and Immunogenicity Analysis of the Expressed FMDV Structural Proteins; VP1, VP0, VP3 of the South African Territories Type 2 Virus, Viruses. 2021 May 27

Ma B, Blanco M, Calvillo L, Chen L, Chen G, Lau TC, Dražić G, Bonin J, Robert M, Granozzi G

Hybridization of Molecular and Graphene Materials for CO Photocatalytic Reduction with Selectivity Control, Journal of the American Chemical Society. 2021 May 25

Shah Z, Naung MT, Moser KA, Adams M, Buchwald AG, Dwivedi A, Ouattara A, Seydel KB, Mathanga DP, Barry AE, Serre D, Laufer MK, Silva JC, Takala-Harrison S

Whole-genome analysis of Malawian Plasmodium falciparum isolates identifies possible targets of allele-specific immunity to clinical malaria, PLoS genetics. 2021 May 25

Villette R, Autaa G, Hind S, Holm JB, Moreno-Sabater A, Larsen M

Refinement of 16S rRNA gene analysis for low biomass biospecimens, Scientific reports. 2021 May 24

Danko D, Bezdan D, Afshin EE, Ahsanuddin S, Bhattacharya C, Butler DJ, Chng KR, Donnellan D, Hecht J, Jackson K, Kuchin K, Karasikov M, Lyons A, Mak L, Meleshko D, Mustafa H, Mutai B, Neches RY, Ng A, Nikolayeva O, Nikolayeva T, Png E, Ryon KA, Sanchez JL, Shaaban H, Sierra MA, Thomas D, Young B, Abudayyeh OO, Alicea J, Bhattacharyya M, Blekhman R, Castro-Nallar E, Cañas AM, Chatziefthimiou AD, Crawford RW, De Filippis F, Deng Y, Desnues C, Dias-Neto E, Dybwad M, Elhaik E, Ercolini D, Frolova A, Gankin D, Gootenberg JS, Graf AB, Green DC, Hajirasouliha I, Hastings JJA, Hernandez M, Iraola G, Jang S, Kahles A, Kelly FJ, Knights K, Kyrpides NC, Łabaj PP, Lee PKH, Leung MHY, Ljungdahl PO, Mason-Buck G, McGrath K, Meydan C, Mongodin EF, Moraes MO, Nagarajan N, Nieto-Caballero M, Noushmehr H, Oliveira M, Ossowski S, Osuolale OO, Özcan O, Paez-Espino D, Rascovan N, Richard H, Rätsch G, Schriml LM, Semmler T, Sezerman OU, Shi L, Shi T, Siam R, Song LH, Suzuki H, Court DS, Tighe SW, Tong X, Udekwu KI, Ugalde JA, Valentine B, Vassilev DI, Vayndorf EM, Velavan TP, Wu J, Zambrano MM, Zhu J, Zhu S, Mason CE,

A global metagenomic map of urban microbiomes and antimicrobial resistance, Cell. 2021 May 22

Rajjoub K, Hess RM, O'Connor TE, Khan A, Siddiqui AH, Levy EI

Drainage, Irrigation, and Fibrinolytic Therapy (DRIFT) for Adult Intraventricular Hemorrhage Using IRRAflow® Self-Irrigating Catheter, Cureus. 2021 May 22

Gogate N, Lyman D, Bell A, Cauley E, Crandall KA, Joseph A, Kahsay R, Natale DA, Schriml LM, Sen S, Mazumder R

COVID-19 biomarkers and their overlap with comorbidities in a disease biomarker data model, Briefings in bioinformatics. 2021 May 20

Qu Y, Zhuang H, Zhang M, Wang Y, Zhai D, Ma B, Wang X, Qin C, Huan Z, Wu C

Bone cements for therapy and regeneration for minimally invasive treatment of neoplastic bone defects, Journal of materials chemistry. B. 2021 May 20

Turpin R, Slopen N, Borgogna JC, Yeoman CJ, He X, Miller RS, Klebanoff MA, Ravel J, Brotman RM

Perceived Stress and Molecular-BV in the NIH Longitudinal Study of Vaginal Flora, American journal of epidemiology. 2021 May 19

Sun H, Ma B, Wu X, Wang H, Zhou B

Long-Term Effect of Salt Substitute on All-Cause and Cardiovascular Disease Mortality: An Exploratory Follow-Up of a Randomized Controlled Trial, Frontiers in cardiovascular medicine. 2021 May 17

Ichikawa Y, Bruno VM, Woolford CA, Kim H, Do E, Brewer G, Mitchell AP

Environmentally contingent control of Candida albicans cell wall integrity by transcriptional regulator Cup9, Genetics. 2021 May 14

Neuwald AF, Kolaczkowski BD, Altschul SF

eCOMPASS: evaluative comparison of multiple protein alignments by statistical score, Bioinformatics (Oxford, England). 2021 May 13

Malaiya S, Cortes-Gutierrez M, Herb BR, Coffey SR, Legg SRW, Cantle JP, Colantuoni C, Carroll JB, Ament SA

Single-Nucleus RNA-Seq Reveals Dysregulation of Striatal Cell Identity Due to Huntington's Disease Mutations, The Journal of neuroscience : the official journal of the Society for Neuroscience. 2021 May 13

Ma J, Qin C, Wu J, Zhang H, Zhuang H, Zhang M, Zhang Z, Ma L, Wang X, Ma B, Chang J, Wu C

3D Printing of Strontium Silicate Microcylinder-Containing Multicellular Biomaterial Inks for Vascularized Skin Regeneration, Advanced healthcare materials. 2021 May 08

Tebben K, Bradwell K, Serre D

Variation in selective constraints along the Plasmodium life cycle, Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases. 2021 May 08

Wu Z, Zhuang H, Ma B, Xiao Y, Koc B, Zhu Y, Wu C

Manganese-Doped Calcium Silicate Nanowire Composite Hydrogels for Melanoma Treatment and Wound Healing, Research (Washington, D.C.). 2021 May 07

Lewis A, McKeon TP, De Roos AJ, Ravel J, Elovitz MA, Burris HH

Associations of public water system trihalomethane exposure during pregnancy with spontaneous preterm birth and the cervicovaginal microbial-immune state, Environmental research. 2021 May 06

Solly EJ, Clough M, McKendrick AM, Foletta P, White OB, Fielding J

Eye movement characteristics provide an objective measure of visual processing changes in patients with visual snow syndrome, Scientific reports. 2021 May 05

Vangay P, Burgin J, Johnston A, Beck KL, Berrios DC, Blumberg K, Canon S, Chain P, Chandonia JM, Christianson D, Costes SV, Damerow J, Duncan WD, Dundore-Arias JP, Fagnan K, Galazka JM, Gibbons SM, Hays D, Hervey J, Hu B, Hurwitz BL, Jaiswal P, Joachimiak MP, Kinkel L, Ladau J, Martin SL, McCue LA, Miller K, Mouncey N, Mungall C, Pafilis E, Reddy TBK, Richardson L, Roux S, Schriml LM, Shaffer JP, Sundaramurthi JC, Thompson LR, Timme RE, Zheng J, Wood-Charlson EM, Eloe-Fadrosh EA

Correction for Vangay et al., "Microbiome Metadata Standards: Report of the National Microbiome Data Collaborative's Workshop and Follow-On Activities", mSystems. 2021 May 04

O'Hanlon DE, Brown SE, He X, Stennett CA, Robbins SJ, Johnston ED, Wnorowski AM, Mark K, Ravel J, Cone RA, Brotman RM

Observational cohort study of the effect of a single lubricant exposure during transvaginal ultrasound on cell-shedding from the vaginal epithelium, PloS one. 2021 May 03

Chung M, Bruno VM, Rasko DA, Cuomo CA, Muñoz JF, Livny J, Shetty AC, Mahurkar A, Dunning Hotopp JC

Best practices on the differential expression analysis of multi-species RNA-seq, Genome biology. 2021 Apr 29

Marini TJ, Rubens DJ, Zhao YT, Weis J, O'Connor TP, Novak WH, Kaproth-Joslin KA

Lung Ultrasound: The Essentials, Radiology. Cardiothoracic imaging. 2021 Apr 29

Kvarta MD, Bruce HA, Chiappelli J, Hare SM, Goldwaser EL, Sewell J, Sampath H, Lightner S, Marshall W, Hatch K, Humphries E, Ament S, Shuldiner AR, Mitchell BD, McMahon FJ, Kochunov P, Hong LE

Multiple dimensions of stress vs. genetic effects on depression, Translational psychiatry. 2021 Apr 29

Borgogna JC, Shardell MD, Grace SG, Santori EK, Americus B, Li Z, Ulanov A, Forney L, Nelson TM, Brotman RM, Ravel J, Yeoman CJ

Biogenic Amines Increase the Odds of Bacterial Vaginosis and Affect the Growth of and Lactic Acid Production by Vaginal spp, Applied and environmental microbiology. 2021 Apr 27

Shardell M, Gravitt PE, Burke AE, Ravel J, Brotman RM

Association of Vaginal Microbiota with Signs and Symptoms of the Genitourinary Syndrome of Menopause across Reproductive Stages, The journals of gerontology. Series A, Biological sciences and medical sciences. 2021 Apr 27

Wang Y, Dai J, Liu Y, Yang J, Hou Q, Ou Y, Ding Y, Ma B, Chen H, Li M, Sun Y, Zheng H, Zhang K, Wubshet AK, Zaberezhny AD, Aliper TI, Tarasiuk K, Pejsak Z, Liu Z, Zhang Y, Zhang J

Development of a Potential Penside Colorimetric LAMP Assay Using Neutral Red for Detection of African Swine Fever Virus, Frontiers in microbiology. 2021 Apr 23

Liu D, Deng B, Liu Z, Ma B, Leng X, Kong D, Ji T, Liu L

Enhanced Antitumor Immune Responses via a Self-Assembled Carrier-Free Nanovaccine, Nano letters. 2021 Apr 22

Cao DY, Hu B, Xue Y, Hanson S, Dessem D, Dorsey SG, Traub RJ

Differential activation of colonic afferents and dorsal horn neurons underlie stress-induced and comorbid visceral hypersensitivity in female rats, The journal of pain. 2021 Apr 19

Cole JW, Adigun T, Akinyemi R, Akpa OM, Bell S, Chen B, Jimenez Conde J, Lazcano Dobao U, Fernandez I, Fornage M, Gallego-Fabrega C, Jern C, Krawczak M, Lindgren A, Markus HS, Melander O, Owolabi M, Schlicht K, Söderholm M, Srinivasasainagendra V, Soriano Tárraga C, Stenman M, Tiwari H, Corasaniti M, Fecteau N, Guizzardi B, Lopez H, Nguyen K, Gaynor B, O'Connor T, Stine OC, Kittner SJ, McArdle P, Mitchell BD, Xu H, Grond-Ginsbach C

The copy number variation and stroke (CaNVAS) risk and outcome study, PloS one. 2021 Apr 19

Chen X, Shi X, Neuwald AF, Hilakivi-Clarke L, Clarke R, Xuan J

ChIP-BIT2: a software tool to detect weak binding events using a Bayesian integration approach, BMC bioinformatics. 2021 Apr 15

Li J, Deng C, Liang W, Kang F, Bai Y, Ma B, Wu C, Dong S

Mn-containing bioceramics inhibit osteoclastogenesis and promote osteoporotic bone regeneration via scavenging ROS, Bioactive materials. 2021 Apr 12

Shardell M, Cappola AR, Guralnik JM, Hicks GE, Kritchevsky SB, Simonsick EM, Ferrucci L, Semba RD, Shaffer NC, Harris T, Eiriksdottir G, Gudnason V, Cotch MF, Orwoll E, Ensrud KE, Cawthon PM

Sex-specific 25-hydroxyvitamin D threshold concentrations for functional outcomes in older adults: PRoject on Optimal VItamin D in Older adults (PROVIDO), The American journal of clinical nutrition. 2021 Apr 07

Hsiao CJ, Paulson JN, Singh S, Mongodin EF, Carroll KC, Fraser CM, Rock P, Faraday N

Nasal Microbiota and Infectious Complications After Elective Surgical Procedures, JAMA network open. 2021 Apr 01

Zhao X, Collins RL, Lee WP, Weber AM, Jun Y, Zhu Q, Weisburd B, Huang Y, Audano PA, Wang H, Walker M, Lowther C, Fu J, , Gerstein MB, Devine SE, Marschall T, Korbel JO, Eichler EE, Chaisson MJP, Lee C, Mills RE, Brand H, Talkowski ME

Expectations and blind spots for structural variation detection from long-read assemblies and short-read genome sequencing technologies, American journal of human genetics. 2021 Mar 30

Liu H, Xu W, Bruno VM, Phan QT, Solis NV, Woolford CA, Ehrlich RL, Shetty AC, McCraken C, Lin J, Bromley MJ, Mitchell AP, Filler SG

Determining Aspergillus fumigatus transcription factor expression and function during invasion of the mammalian lung, PLoS pathogens. 2021 Mar 29

Tvedte ES, Gasser M, Sparklin BC, Michalski J, Hjelmen CE, Johnston JS, Zhao X, Bromley R, Tallon LJ, Sadzewicz L, Rasko DA, Hotopp JCD

Comparison of long read sequencing technologies in interrogating bacteria and fly genomes, G3 (Bethesda, Md.). 2021 Mar 26

Ma B, Lu F, Zhi G, Xue X, Zhao X, Ma C, Fan Y, Yang M

Development of an X-Band Reflectarray Antenna for Satellite Communications, Scientific reports. 2021 Mar 22

Cai Q, Jiang J, Ma B, Shao Z, Hu Y, Qian B, Wang L

Efficient removal of phosphate impurities in waste phosphogypsum for the production of cement, The Science of the total environment. 2021 Mar 19

Yuan Y, Wang H, Zhao J, Jing N, Xu J, Li W, Ma B, Zhang J, Li G, Wang S, Li Y, Wang Y, Fan E, Li L

Severe Acute Respiratory Syndrome Coronavirus 2 Viral RNA Load Status and Antibody Distribution Among Patients and Asymptomatic Carriers in Central China, Frontiers in cellular and infection microbiology. 2021 Mar 19

Bruce HA, Kochunov P, Chiappelli J, Savransky A, Carino K, Sewell J, Marshall W, Kvarta M, McMahon FJ, Ament SA, Postolache TT, O'Connell J, Shuldiner A, Mitchell B, Hong LE

Genetic versus stress and mood determinants of sleep in the Amish, American journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics. 2021 Mar 01

Strålin K, Wahlström E, Walther S, Bennet-Bark AM, Heurgren M, Lindén T, Holm J, Hanberger H

Mortality trends among hospitalised COVID-19 patients in Sweden: A nationwide observational cohort study, The Lancet regional health. Europe. 2021 Feb 26

Ebert P, Audano PA, Zhu Q, Rodriguez-Martin B, Porubsky D, Bonder MJ, Sulovari A, Ebler J, Zhou W, Serra Mari R, Yilmaz F, Zhao X, Hsieh P, Lee J, Kumar S, Lin J, Rausch T, Chen Y, Ren J, Santamarina M, Höps W, Ashraf H, Chuang NT, Yang X, Munson KM, Lewis AP, Fairley S, Tallon LJ, Clarke WE, Basile AO, Byrska-Bishop M, Corvelo A, Evani US, Lu TY, Chaisson MJP, Chen J, Li C, Brand H, Wenger AM, Ghareghani M, Harvey WT, Raeder B, Hasenfeld P, Regier AA, Abel HJ, Hall IM, Flicek P, Stegle O, Gerstein MB, Tubio JMC, Mu Z, Li YI, Shi X, Hastie AR, Ye K, Chong Z, Sanders AD, Zody MC, Talkowski ME, Mills RE, Devine SE, Lee C, Korbel JO, Marschall T, Eichler EE

Haplotype-resolved diverse human genomes and integrated analysis of structural variation, Science (New York, N.Y.). 2021 Feb 25

Podlesny D, Fricke WF

Strain inheritance and neonatal gut microbiota development: A meta-analysis, International journal of medical microbiology : IJMM. 2021 Feb 25

Vangay P, Burgin J, Johnston A, Beck KL, Berrios DC, Blumberg K, Canon S, Chain P, Chandonia JM, Christianson D, Costes SV, Damerow J, Duncan WD, Dundore-Arias JP, Fagnan K, Galazka JM, Gibbons SM, Hays D, Hervey J, Hu B, Hurwitz BL, Jaiswal P, Joachimiak MP, Kinkel L, Ladau J, Martin SL, McCue LA, Miller K, Mouncey N, Mungall C, Pafilis E, Reddy TBK, Richardson L, Roux S, Schriml LM, Shaffer JP, Sundaramurthi JC, Thompson LR, Timme RE, Zheng J, Wood-Charlson EM, Eloe-Fadrosh EA

Microbiome Metadata Standards: Report of the National Microbiome Data Collaborative's Workshop and Follow-On Activities, mSystems. 2021 Feb 23

Watson VE, Hazen TH, Rasko DA, Jacob ME, Elfenbein JR, Stauffer SH, Gookin JL

Comparative Genomics of Atypical Enteropathogenic Escherichia coli from Kittens and Children Identifies Bacterial Factors Associated with Virulence in Kittens, Infection and immunity. 2021 Feb 16

Yan WJ, Jing N, Wang SM, Xu JH, Yuan YH, Zhang Q, Li AL, Chen LH, Zhang JF, Ma B, Ma Q, Li Y

Molecular characterization of carbapenem-resistant and emergence of tigecycline non-susceptible strains in the Henan province in China: a multicentrer study, Journal of medical microbiology. 2021 Feb 15

Tuddenham S, Ravel J, Marrazzo JM

Protection and Risk: Male and Female Genital Microbiota and Sexually Transmitted Infections, The Journal of infectious diseases. 2021 Feb 12

Taliun D, Harris DN, Kessler MD, Carlson J, Szpiech ZA, Torres R, Taliun SAG, Corvelo A, Gogarten SM, Kang HM, Pitsillides AN, LeFaive J, Lee SB, Tian X, Browning BL, Das S, Emde AK, Clarke WE, Loesch DP, Shetty AC, Blackwell TW, Smith AV, Wong Q, Liu X, Conomos MP, Bobo DM, Aguet F, Albert C, Alonso A, Ardlie KG, Arking DE, Aslibekyan S, Auer PL, Barnard J, Barr RG, Barwick L, Becker LC, Beer RL, Benjamin EJ, Bielak LF, Blangero J, Boehnke M, Bowden DW, Brody JA, Burchard EG, Cade BE, Casella JF, Chalazan B, Chasman DI, Chen YI, Cho MH, Choi SH, Chung MK, Clish CB, Correa A, Curran JE, Custer B, Darbar D, Daya M, de Andrade M, DeMeo DL, Dutcher SK, Ellinor PT, Emery LS, Eng C, Fatkin D, Fingerlin T, Forer L, Fornage M, Franceschini N, Fuchsberger C, Fullerton SM, Germer S, Gladwin MT, Gottlieb DJ, Guo X, Hall ME, He J, Heard-Costa NL, Heckbert SR, Irvin MR, Johnsen JM, Johnson AD, Kaplan R, Kardia SLR, Kelly T, Kelly S, Kenny EE, Kiel DP, Klemmer R, Konkle BA, Kooperberg C, Köttgen A, Lange LA, Lasky-Su J, Levy D, Lin X, Lin KH, Liu C, Loos RJF, Garman L, Gerszten R, Lubitz SA, Lunetta KL, Mak ACY, Manichaikul A, Manning AK, Mathias RA, McManus DD, McGarvey ST, Meigs JB, Meyers DA, Mikulla JL, Minear MA, Mitchell BD, Mohanty S, Montasser ME, Montgomery C, Morrison AC, Murabito JM, Natale A, Natarajan P, Nelson SC, North KE, O'Connell JR, Palmer ND, Pankratz N, Peloso GM, Peyser PA, Pleiness J, Post WS, Psaty BM, Rao DC, Redline S, Reiner AP, Roden D, Rotter JI, Ruczinski I, Sarnowski C, Schoenherr S, Schwartz DA, Seo JS, Seshadri S, Sheehan VA, Sheu WH, Shoemaker MB, Smith NL, Smith JA, Sotoodehnia N, Stilp AM, Tang W, Taylor KD, Telen M, Thornton TA, Tracy RP, Van Den Berg DJ, Vasan RS, Viaud-Martinez KA, Vrieze S, Weeks DE, Weir BS, Weiss ST, Weng LC, Willer CJ, Zhang Y, Zhao X, Arnett DK, Ashley-Koch AE, Barnes KC, Boerwinkle E, Gabriel S, Gibbs R, Rice KM, Rich SS, Silverman EK, Qasba P, Gan W, , Papanicolaou GJ, Nickerson DA, Browning SR, Zody MC, Zöllner S, Wilson JG, Cupples LA, Laurie CC, Jaquish CE, Hernandez RD, O'Connor TD, Abecasis GR

Sequencing of 53,831 diverse genomes from the NHLBI TOPMed Program, Nature. 2021 Feb 10

Zhang X, Chen H, Lei Y, Zhang X, Xu L, Liu W, Fan Z, Ma Z, Yin Z, Li L, Zhu C, Ma B

Multifunctional agents based on benzoxazolone as promising therapeutic drugs for diabetic nephropathy, European journal of medicinal chemistry. 2021 Feb 07

Wang B, Ma B, Wei Z, Yang H, Wang M, Yin W, Gao H, Liu W

Lanthanide Supermolecular Transformers Induced by K and CO, Inorganic chemistry. 2021 Feb 01

Popovici J, Tebben K, Witkowski B, Serre D

Primaquine for Plasmodium vivax radical cure: What we do not know and why it matters, International journal for parasitology. Drugs and drug resistance. 2021 Jan 24

Ma B, Fan X, Kong W, Xiao S, Zhu S, Yao M, Liu Y, Zhu W, Wang J, Zeng Y, Zhao Y, Su B, Xu S, Dong Z, Gu H, Li W, Jiang Y, Gu D, Xia Z

Expert Consensus on Clinical Practice of Burn Units in Shanghai during the COVID-19 Epidemic, Journal of burn care & research : official publication of the American Burn Association. 2021 Jan 23

Zhang S, Sousa A, Lin M, Iwano A, Jain R, Ma B, Lee CM, Park JW, Kamle S, Carlson R, Lee GG, Elias JA, Wands JR

Role of Chitinase 3-Like 1 Protein in the Pathogenesis of Hepatic Insulin Resistance in Nonalcoholic Fatty Liver Disease, Cells. 2021 Jan 20

Soliman SSM, Baldin C, Gu Y, Singh S, Gebremariam T, Swidergall M, Alqarihi A, Youssef EG, Alkhazraji S, Pikoulas A, Perske C, Venkataramani V, Rich A, Bruno VM, Hotopp JD, Mantis NJ, Edwards JE, Filler SG, Chamilos G, Vitetta ES, Ibrahim AS

Mucoricin is a ricin-like toxin that is critical for the pathogenesis of mucormycosis, Nature microbiology. 2021 Jan 18

Fricke WF, Ravel J

Microbiome or no microbiome: are we looking at the prenatal environment through the right lens?, Microbiome. 2021 Jan 12

Chung M, Adkins RS, Mattick JSA, Bradwell KR, Shetty AC, Sadzewicz L, Tallon LJ, Fraser CM, Rasko DA, Mahurkar A, Dunning Hotopp JC

FADU: a Quantification Tool for Prokaryotic Transcriptomic Analyses, mSystems. 2021 Jan 12

Chen X, Gu J, Neuwald AF, Hilakivi-Clarke L, Clarke R, Xuan J

Identifying intracellular signaling modules and exploring pathways associated with breast cancer recurrence, Scientific reports. 2021 Jan 11

Kamle S, Ma B, He CH, Akosman B, Zhou Y, Lee CM, El-Deiry WS, Huntington K, Liang O, Machan J, Kang MJ, Shin HJ, Mizoguchi E, Lee CG, Elias JA

Chitinase 3-like-1 is a Therapeutic Target That Mediates the Effects of Aging in COVID-19, bioRxiv : the preprint server for biology. 2021 Jan 06

Lin M, Xiong Q, Chung M, Daugherty SC, Nagaraj S, Sengamalay N, Ott S, Godinez A, Tallon LJ, Sadzewicz L, Fraser C, Dunning Hotopp JC, Rikihisa Y

Comparative Analysis of Genome of Ehrlichia sp. HF, a Model Bacterium to Study Fatal Human Ehrlichiosis, BMC genomics. 2021 Jan 06

Ben C, Liu X, Shen T, Song Y, Li H, Pan B, Hou W, Liu T, Luo P, Ma B, Sun Y, Xiao S, Xia Z, Cheng D, Zhu S

A recombinant human collagen hydrogel for the treatment of partial-thickness burns: A prospective, self-controlled clinical study, Burns : journal of the International Society for Burn Injuries. 2021 Jan 02