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Publications - Publications 2024
Characterization of from subjects with diffuse panbronchiolitis, Microbiology spectrum. 2024 Oct 08
Dynamic Event-Triggered Strategy-Based Optimal Control of Modular Robot Manipulator: A Multiplayer Nonzero-Sum Game Perspective, IEEE transactions on cybernetics. 2024 Oct 07
Efficacy and feasibility of a novel semi-facial respirator with chitosan nanoparticles on the incidence of SARS-CoV-2 infection in healthcare professionals: randomized controlled trial, BMC infectious diseases. 2024 Sep 27
SpeciateIT and vSpeciateDB: novel, fast, and accurate per sequence 16S rRNA gene taxonomic classification of vaginal microbiota, BMC bioinformatics. 2024 Sep 27
Updated annotation and meta-analysis of Brugia malayi transcriptomics data reveals consistent transcriptional profiles across time and space with some study-specific differences in adult female worm transcriptional profiles, PLoS neglected tropical diseases. 2024 Sep 26
The inverse association between cancer history and incident cognitive impairment: Addressing attrition bias, Alzheimer's & dementia : the journal of the Alzheimer's Association. 2024 Sep 26
Effects and individual response of salt substitute intervention on blood pressure in a high-risk stroke population: findings from 4200 participants of the China Salt Substitute and Stroke Study, Food & function. 2024 Sep 25
Complex genetic variation in nearly complete human genomes, bioRxiv : the preprint server for biology. 2024 Sep 25
Vaginal microbiota stability over 18 months in young student women in France, European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology. 2024 Sep 20
Chitinase 3-like-1 Inhibits Innate Antitumor and Tissue Remodeling Immune Responses by Regulating CD47-SIRPα- and CD24-Siglec10-Mediated Phagocytosis, Journal of immunology (Baltimore, Md. : 1950). 2024 Sep 18
Deciphering transcript architectural complexity in bacteria and archaea, mBio. 2024 Sep 17
The Synergistic Effect of Calcained Coal-Series Kaolinite and Limestone on the Hydration of Portland Cement, Materials (Basel, Switzerland). 2024 Sep 13
The transcriptome of playfulness is sex-biased in the juvenile rat medial amygdala: a role for inhibitory neurons, bioRxiv : the preprint server for biology. 2024 Sep 11
Epidermal Growth Factor Receptor Signaling Governs the Host Inflammatory Response to Invasive Aspergillosis, bioRxiv : the preprint server for biology. 2024 Sep 10
Monitoring the Influence of Hand, Foot, and Mouth Disease: New Guidelines on Patient Care during the 2011-2012 Multiwaves and Multivariant Outbreak in Hai Phong City, Vietnam, Pathogens (Basel, Switzerland). 2024 Sep 09
The National Cancer Institute Clinical Trials Planning Meeting to Address Gaps in Observational and Intervention Trials for Cancer-Related Cognitive Impairment, Journal of the National Cancer Institute. 2024 Sep 09
Safety and Tolerability of ShigActive™, a spp. Targeting Bacteriophage Preparation, in a Phase 1 Randomized, Double-Blind, Controlled Clinical Trial, Antibiotics (Basel, Switzerland). 2024 Sep 07
Single-cell analyses of polyclonal Plasmodium vivax infections and their consequences on parasite transmission, Nature communications. 2024 Sep 02
Retraction: Chitinase 1 regulates pulmonary fibrosis by modulating TGF-β/SMAD7 pathway via TGFBRAP1 and FOXO3, Life science alliance. 2024 Aug 29
Maize Dek51 encodes a DEAD-box RNA helicase essential for pre-rRNA processing and seed development, Cell reports. 2024 Aug 27
are major contributors of sialidases in the human vaginal microbiome, Proceedings of the National Academy of Sciences of the United States of America. 2024 Aug 26
Unveiling the Role of PIK3R1 in Cancer: A Comprehensive Review of Regulatory Signaling and Therapeutic Implications, Seminars in cancer biology. 2024 Aug 26
Chitinase 3-like-1 (CHI3L1) in the pathogenesis of epidermal growth factor receptor mutant non-small cell lung cancer, Translational oncology. 2024 Aug 22
Connecting the dots: investigating the link between environmental, genetic, and epigenetic influences in metabolomic alterations in oral squamous cell carcinoma, Journal of experimental & clinical cancer research : CR. 2024 Aug 21
Immune gene expression changes more during a malaria transmission season than between consecutive seasons, Microbiology spectrum. 2024 Aug 20
Prebiotic Treatment in People With Schizophrenia, Journal of clinical psychopharmacology. 2024 Aug 16
Natural selection and recombination at host-interacting lipoprotein loci drive genome diversification of Lyme disease and related bacteria, mBio. 2024 Aug 15
Genomic reproducibility in the bioinformatics era, Genome biology. 2024 Aug 09
Beyond LDL-C: unravelling the residual atherosclerotic cardiovascular disease risk landscape-focus on hypertriglyceridaemia, Frontiers in cardiovascular medicine. 2024 Aug 07
Publisher Correction: An open dataset for intelligent recognition and classification of abnormal condition in longwall mining, Scientific data. 2024 Aug 06
A High Dynamic Range Ion Detector for Multireflection Time-of-Flight Analyzers, Journal of the American Society for Mass Spectrometry. 2024 Aug 03
Impact of Prior Inotuzumab Ozogamicin Treatment on Brexucabtagene Autoleucel outcomes in Adults with B-cell ALL, Blood advances. 2024 Aug 02
Sex differences and predictors of anti-osteoporosis medication use in the 12 months after hip fracture surgery in adults 65 or older, Osteoporosis international : a journal established as result of cooperation between the European Foundation for Osteoporosis and the National Osteoporosis Foundation of the USA. 2024 Aug 02
MAMS: matrix and analysis metadata standards to facilitate harmonization and reproducibility of single-cell data, Genome biology. 2024 Aug 01
Response of soil moisture to rainfall following deep soil drying in China's hilly loess lands, The Science of the total environment. 2024 Jul 30
The need to diversify genomic studies: Insights from Andean highlanders and Amazonians, Cell. 2024 Jul 30
Modeling the Dynamic of Multiwave Diseases: The Model of Hand, Foot and Mouth Disease, Viruses. 2024 Jul 29
Association between pre-hip fracture depression and days at home after fracture and assessing sex differences, Journal of the American Geriatrics Society. 2024 Jul 20
Ultrafine Asymmetric Soft/Stiff Nanohybrids with Tunable Patchiness via a Dynamic Surface-Mediated Assembly, Journal of the American Chemical Society. 2024 Jul 18
nQuack: An R package for predicting ploidal level from sequence data using site-based heterozygosity, Applications in plant sciences. 2024 Jul 14
Genetic Variations in TrkB.T1 Isoform and Their Association With Somatic and Psychological Symptoms in Individuals With IBS, The journal of pain. 2024 Jul 14
Seasonal variations in soil microbial community co-occurrence network complexity respond differently to field-simulated warming experiments in a northern subtropical forest, The Science of the total environment. 2024 Jul 11
Atrial Fibrillation and Older Age Predict Serum Brain-Derived Neurotrophic Factor Levels Among Patients With Heart Failure, The Journal of cardiovascular nursing. 2024 Jul 10
Dual species transcriptomics reveals conserved metabolic and immunologic processes in interactions between human neutrophils and Neisseria gonorrhoeae, PLoS pathogens. 2024 Jul 08
Oral Microbiota Alterations in Subjects with SARS-CoV-2 Displaying Prevalence of the Opportunistic Fungal Pathogen , Microorganisms. 2024 Jul 02
Comparison of shipping versus immediate freezer storage of vaginal samples for vaginal microbiota assessment, Sexually transmitted infections. 2024 Jul 02
ClOneHORT: Approaches for Improved Fidelity in Generative Models of Synthetic Genomes, bioRxiv : the preprint server for biology. 2024 Jun 29
Adult expression of the cell adhesion protein Fasciclin 3 is required for the maintenance of adult olfactory interneurons, Journal of cell science. 2024 Jun 27
Lack of mismatch repair enhances resistance to methylating agents for cells deficient in oxidative demethylation, The Journal of biological chemistry. 2024 Jun 24
Use of drugs for hypertension or heart failure and the risk of death in COVID-19: association with loop-diuretics, European journal of clinical pharmacology. 2024 Jun 24
Fe-O Motif Activated Graphitic Carbon via Oxo-Bridge for Highly Selective HO Electrosynthesis, Angewandte Chemie (International ed. in English). 2024 Jun 21
Impact of Lime Saturation Factor on Alite-Ye'Elimite Cement Synthesis and Hydration, Materials (Basel, Switzerland). 2024 Jun 20
Inflammatory Bowel Disease-Associated Arthritis Is Associated with Concomitant Autoimmune and Inflammatory Disorders, Digestive diseases and sciences. 2024 Jun 20
Multiple roles for hypoxia inducible factor 1-alpha in airway epithelial cells during mucormycosis, Nature communications. 2024 Jun 20
Update on heme biosynthesis, tissue-specific regulation, heme transport, relation to iron metabolism and cellular energy, Liver international : official journal of the International Association for the Study of the Liver. 2024 Jun 18
The single-cell opioid responses in the context of HIV (SCORCH) consortium, Molecular psychiatry. 2024 Jun 15
Global burden of type 1 diabetes in adults aged 65 years and older, 1990-2019: population based study, BMJ (Clinical research ed.). 2024 Jun 12
Gut microbial diversity and functional characterization in people with alcohol use disorder: A case-control study, PloS one. 2024 Jun 12
An Unexpected Post-Egg-Free Influenza Vaccine Granulomatous Reaction, The American Journal of dermatopathology. 2024 Jun 06
Vaginal microbes alter epithelial transcriptome and induce epigenomic modifications providing insight into mechanisms for susceptibility to adverse reproductive outcomes, Research square. 2024 May 31
Variation in spatial population structure in the species complex, bioRxiv : the preprint server for biology. 2024 May 31
Machine learning models for predicting blood pressure phenotypes by combining multiple polygenic risk scores, Scientific reports. 2024 May 30
Gene expression signatures in blood from a West African sepsis cohort define host response phenotypes, Nature communications. 2024 May 30
The Influence of Retreated Lithium Slag with a High Content of Alkali, Sulfate and Fluoride on the Composition and the Microstructure of Autoclaved Aerated Concrete, Materials (Basel, Switzerland). 2024 May 27
Unraveling the Variability of Human Satiation: Implications for Precision Obesity Management, Research square. 2024 May 23
Quantitative analysis of heme and hemoglobin for the detection of intravascular hemolysis, Analytica chimica acta. 2024 May 21
Brain-wide functional connectome analysis of 40,000 individuals reveals brain networks that show aging effects in older adults, bioRxiv : the preprint server for biology. 2024 May 17
Peripheral blood transcriptomic profiling of molecular mechanisms commonly regulated by binge drinking and placebo effects, Scientific reports. 2024 May 10
A cell type-specific approach to elucidate the role of miR-96 in inner ear hair cells, Frontiers in audiology and otology. 2024 May 09
Multi-omic Analysis of Uterine Leiomyomas in Self-Described Black and White Women: Molecular Insights into Health Disparities, American journal of obstetrics and gynecology. 2024 May 07
ZMapp reduces diffusion of Ebola viral particles in fresh human cervicovaginal mucus, Emerging microbes & infections. 2024 May 07
Transcriptomic Profiles Associated with Experimental Placebo Effects in Chronic Pain, Clinical pharmacology and therapeutics. 2024 May 06
Doubly Robust Causal Modeling to Evaluate Device Implantation, JAMA internal medicine. 2024 May 06
Benchmarking and Optimization of Methods for the Detection of Identity-By-Descent in , bioRxiv : the preprint server for biology. 2024 May 05
STAG2 mutations regulate 3D genome organization, chromatin loops, and Polycomb signaling in glioblastoma multiforme, The Journal of biological chemistry. 2024 May 03
Dequalinium Chloride-An Emerging Option in the Sparse Landscape of Bacterial Vaginosis Therapies, JAMA network open. 2024 May 01
A secondary mechanism of action for triazole antifungals in Aspergillus fumigatus mediated by hmg1, Nature communications. 2024 Apr 29
Dissecting Genetic Mechanisms of Differential Locomotion, Depression, and Allodynia after Spinal Cord Injury in Three Mouse Strains, Cells. 2024 Apr 29
Lipid A Structural Variants Induce Altered Immune Responses, American journal of respiratory cell and molecular biology. 2024 Apr 24
Radiomic biomarkers of locoregional recurrence: prognostic insights from oral cavity squamous cell carcinoma preoperative CT scans, Frontiers in oncology. 2024 Apr 23
SpeciateIT and vSpeciateDB: Novel, fast and accurate per sequence 16S rRNA gene taxonomic classification of vaginal microbiota, bioRxiv : the preprint server for biology. 2024 Apr 22
Comparing the effect of imputation reference panel composition in four distinct Latin American cohorts, bioRxiv : the preprint server for biology. 2024 Apr 15
Coupled conversion of polyethylene and carbon dioxide catalyzed by a zeolite-metal oxide system, Science advances. 2024 Apr 12
Global, Regional, and National Burdens of Stroke in Children and Adolescents From 1990 to 2019: A Population-Based Study, Stroke. 2024 Apr 09
Early Immunomodulatory Program Triggered by Protolerogenic Bifidobacterium pseudolongum Drives Cardiac Transplant Outcomes, Transplantation. 2024 Apr 08
Implanting colloidal nanoparticles into single-crystalline zeolites for Catalytic Dehydration, Angewandte Chemie (International ed. in English). 2024 Apr 05
Deciphering Bacterial and Archaeal Transcriptional Dark Matter and Its Architectural Complexity, bioRxiv : the preprint server for biology. 2024 Apr 02
Gastrointestinal signals in supplemented media reveal a role in adherence for the autotransporter gene, Gut microbes. 2024 Mar 28
Safety Testing of Ovaprene: an Investigational Non-Hormonal Monthly Vaginal Contraceptive, Contraception. 2024 Mar 27
Application of Covalent Binding Body Burden in the HμREL Human Hepatocyte Coculture Model for Reactivity Risk Assessment of Metabolically Low Turnover Drugs, Chemical research in toxicology. 2024 Mar 26
Functional Redundancy in Candida auris Cell Surface Adhesins Crucial for Cell-Cell Interaction and Aggregation, Research square. 2024 Mar 22
Functional Redundancy in Cell Surface Adhesins Crucial for Cell-Cell Interaction and Aggregation, bioRxiv : the preprint server for biology. 2024 Mar 21
Employee Proactive Personality and Career Growth: The Role of Proactive Behavior and Leader Proactive Personality, Behavioral sciences (Basel, Switzerland). 2024 Mar 21
A C-Type Lectin, RfCTL27, Activates the Immune Defense in the Red Palm Weevil (A.G. Olivier, 1791) (Coleoptera: Curculionidae: Dryophthorinae) by the Recognition of Gram-Negative Bacteria, Insects. 2024 Mar 21
Extracellular vesicles from vaginal Gardnerella vaginalis and Mobiluncus mulieris contain distinct proteomic cargo and induce inflammatory pathways, NPJ biofilms and microbiomes. 2024 Mar 21
Multi-Omics Analysis of Gut Microbiota and Host Transcriptomics Reveal Dysregulated Immune Response and Metabolism in Young Adults with Irritable Bowel Syndrome, International journal of molecular sciences. 2024 Mar 20
Strong positive selection biases identity-by-descent-based inferences of recent demography and population structure in Plasmodium falciparum, Nature communications. 2024 Mar 20
Untangling Associations of Microbiomes of Pregnancy and Preterm Birth, Clinics in perinatology. 2024 Mar 15
The DTC microbiome testing industry needs more regulation, Science (New York, N.Y.). 2024 Mar 14
Multimodal interrogation of ventral pallidum projections reveals projection-specific signatures and effects on cocaine reward, The Journal of neuroscience : the official journal of the Society for Neuroscience. 2024 Mar 14
Tick hemocytes have a pleiotropic role in microbial infection and arthropod fitness, Nature communications. 2024 Mar 08
Gene expression analyses reveal differences in children's response to malaria according to their age, Nature communications. 2024 Mar 06
Clinical and genomic characterization of chemoradiation-resistant HPV-positive oropharyngeal squamous cell carcinoma, Frontiers in oncology. 2024 Mar 05
Pharmacogenetic and clinical risk factors for bevacizumab-related gastrointestinal hemorrhage in prostate cancer patients treated on CALGB 90401 (Alliance), The pharmacogenomics journal. 2024 Mar 04
Inferring stability and persistence in the vaginal microbiome: A stochastic model of ecological dynamics, bioRxiv : the preprint server for biology. 2024 Mar 03
transcriptome dissection of neocortical excitatory neurogenesis via joint matrix decomposition and transfer learning, bioRxiv : the preprint server for biology. 2024 Feb 28
Emergent trees in woodland: influence of elephant density on persistence attrition, PeerJ. 2024 Feb 26
The impact of cancer metastases on COVID-19 outcomes: A COVID-19 and Cancer Consortium registry-based retrospective cohort study, Cancer. 2024 Feb 20
ExpLOring the role of the intestinal MiCrobiome in InflammATory bowel disease-AssocIated SpONdylarthritis (LOCATION-IBD), Heliyon. 2024 Feb 18
Sexual transmission of urogenital bacteria: whole metagenome sequencing evidence from a sexual network study, mSphere. 2024 Feb 15
Improved metagenome assemblies through selective enrichment of bacterial genomic DNA from eukaryotic host genomic DNA using ATAC-seq, Frontiers in microbiology. 2024 Feb 15
Single-cell analyses of polyclonal Plasmodium vivax infections and their consequences on parasite transmission, Research square. 2024 Feb 13
Survival disparities in non-Hispanic Black and White cervical cancer patients vary by histology and are largely explained by modifiable factors, Gynecologic oncology. 2024 Feb 09
Correction: Integrating compositional and functional content to describe vaginal microbiomes in health and disease, Microbiome. 2024 Feb 06
Micelle-directed self-assembly of single-crystal-like mesoporous stoichiometric oxides for high-performance lithium storage, National science review. 2024 Feb 06
Uterine fibroids and longitudinal profiles of the vaginal microbiota in a cohort presenting for transvaginal ultrasound, PloS one. 2024 Feb 05
The cells of the sensory epithelium, and not the stria vascularis, are the main cochlear cells related to the genetic pathogenesis of age-related hearing loss, American journal of human genetics. 2024 Feb 02
Insights into the mechanisms and structure of breakage-fusion-bridge cycles in cervical cancer using long-read sequencing, American journal of human genetics. 2024 Jan 25
Racial, ethnic and country of origin disparities in aggressive endometrial cancer histologic subtypes, Gynecologic oncology. 2024 Jan 25
Secondary analysis: heat and self-report pain sensitivity associate with biological sex and racialized sociocultural group but may not be mediated by anxiety or pain catastrophizing, Pain reports. 2024 Jan 24
Visuo-Cognitive Phenotypes in Early Multiple Sclerosis: A Multisystem Model of Visual Processing, Journal of clinical medicine. 2024 Jan 23
A Longitudinal Metagenomic Comparative Analysis of Oral Microbiome Shifts in Patients Receiving Proton Radiation versus Photon Radiation for Head and Neck Cancer, Journal of cancer & allied specialties. 2024 Jan 22
Radiomic Biomarkers of Locoregional Recurrence: Prognostic Insights from Oral Cavity Squamous Cell Carcinoma preoperative CT scans, Research square. 2024 Jan 22
The role of neighborhood deprivation in the cervicovaginal microbiota, American journal of obstetrics & gynecology MFM. 2024 Jan 19
Factors associated with patient-to-healthcare personnel (HCP) and HCP-to-subsequent patient transmission of methicillin-resistant , Infection control and hospital epidemiology. 2024 Jan 18
Improvement of the Antioxidant and Antitumor Activities of Benzimidazole-Chitosan Quaternary Ammonium Salt on Drug Delivery Nanogels, Marine drugs. 2024 Jan 11
Rapid effects of valproic acid on the fetal brain transcriptome: Implications for brain development and autism, Research square. 2024 Jan 10
Evaluation of Dynamic Effects of Depressive Symptoms on Physical Function in Knee Osteoarthritis, Arthritis care & research. 2024 Jan 10
Maize requires Embryo defective27 for embryogenesis and seedling development, Plant physiology. 2024 Jan 10
DeepFreeze 3D-biofabrication for Bioengineering and Storage of Stem Cells in Thick and Large-Scale Human Tissue Analogs, Advanced science (Weinheim, Baden-Wurttemberg, Germany). 2024 Jan 06
Global, Regional, and National Burdens of Otitis Media From 1990 to 2019: A Population Based Study, Ear and hearing. 2024 Jan 05
Exploring Factors That Prolong the Diagnosis of Myasthenia Gravis, Neurology. Clinical practice. 2024 Jan 04
Mesoporous Bioactive Glass-Graphene Oxide Composite Aerogel with Effective Hemostatic and Antibacterial Activities, ACS applied bio materials. 2024 Jan 03
BilR is a gut microbial enzyme that reduces bilirubin to urobilinogen, Nature microbiology. 2024 Jan 03