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Publications - Publications 2022

Iva P, Martin R, Fielding J, Clough M, White O, Godic B, van der Walt A, Rajan R

Discriminating spatialised speech in complex environments in multiple sclerosis, Cortex; a journal devoted to the study of the nervous system and behavior. 2022 Dec 24

Yang GS, Yang K, Weaver MT, Lynch Kelly D, Dorsey SG, Jackson-Cook CK, Lyon DE

Exploring the relationship between DNA methylation age measures and psychoneurological symptoms in women with early-stage breast cancer, Supportive care in cancer : official journal of the Multinational Association of Supportive Care in Cancer. 2022 Dec 20

Yang F, Zhu D, Wang Z, Ma Y, Huang L, Kang X, Ma B

Role of Advanced Glycation End Products in Intervertebral Disc Degeneration: Mechanism and Therapeutic Potential, Oxidative medicine and cellular longevity. 2022 Dec 17

Tuddenham S, Gajer P, Burke AE, Murphy C, Klein SL, Stennett CA, Wilgus B, Ravel J, Ghanem KG, Brotman RM

Lactobacillus-dominance and rapid stabilization of vaginal microbiota in combined oral contraceptive pill users examined through a longitudinal cohort study with frequent vaginal sampling over two years, EBioMedicine. 2022 Dec 16

Hazzard B, Sá JM, Ellis AC, Pascini TV, Amin S, Wellems TE, Serre D

Long read single cell RNA sequencing reveals the isoform diversity of Plasmodium vivax transcripts, PLoS neglected tropical diseases. 2022 Dec 16

Zhao J, Jung S, Li X, Li L, Kasinath V, Zhang H, Movahedi SN, Mardini A, Sabiu G, Hwang Y, Saxena V, Song Y, Ma B, Acton SE, Kim P, Madsen JC, Sage PT, Tullius SG, Tsokos GC, Bromberg JS, Abdi R

Delivery of costimulatory blockade to lymph nodes promotes transplant acceptance in mice, The Journal of clinical investigation. 2022 Dec 15

Zhang Z, Li W, Chang D, Wei Z, Wang E, Yu J, Xu Y, Que Y, Chen Y, Fan C, Ma B, Zhou Y, Huan Z, Yang C, Guo F, Chang J

A combination therapy for androgenic alopecia based on quercetin and zinc/copper dual-doped mesoporous silica nanocomposite microneedle patch, Bioactive materials. 2022 Dec 13

Strik M, Clough M, Solly EJ, Glarin R, White OB, Kolbe SC, Fielding J

Brain network dynamics in people with visual snow syndrome, Human brain mapping. 2022 Dec 08

Lei Y, Dong F, Liu X, Ma B, Huang W

Short-term variations and correlations in water quality after dam removal in the Chishui river basin, Journal of environmental management. 2022 Dec 02

Ashing KT, Song G, Tiep B, Presant C, Obodo U, Macalintal J, Yeung S, Sandoval J, O'Connor T

Does neighborhood or residence influence continued smoking among cancer patients: a spatial-ecological and descriptive analyses brief report, Cancer causes & control : CCC. 2022 Nov 30

Morais-Silva G, Campbell RR, Nam H, Basu M, Pagliusi M, Fox ME, Chan S, Iñiguez SD, Ament S, Cramer N, Marin MT, Lobo MK

Molecular, circuit, and stress response characterization of Ventral Pallidum Npas1-neurons, The Journal of neuroscience : the official journal of the Society for Neuroscience. 2022 Nov 28

Li L, Ma B, Liu F, Sheng C, Peng Y, Qiao Y, Wang P, Chen K, Song F

The Number of Positive Tumor Markers (NPTM) Achieves Higher Value in the Prognosis Prediction of Gastric Cancer, Disease markers. 2022 Nov 28

Mahajan G, Doherty E, To T, Sutherland A, Grant J, Junaid A, Gulati A, LoGrande N, Izadifar Z, Timilsina SS, Horváth V, Plebani R, France M, Hood-Pishchany I, Rakoff-Nahoum S, Kwon DS, Goyal G, Prantil-Baun R, Ravel J, Ingber DE

Vaginal microbiome-host interactions modeled in a human vagina-on-a-chip, Microbiome. 2022 Nov 26

Seneviratne C, Shetty AC, Geng X, McCracken C, Cornell J, Mullins K, Jiang F, Stass S

A Pilot Analysis of Circulating cfRNA Transcripts for the Detection of Lung Cancer, Diagnostics (Basel, Switzerland). 2022 Nov 22

France M, Ma B, Ravel J

Persistence and Evolution of Vaginal Bacterial Strains over a Multiyear Time Period, mSystems. 2022 Nov 22

Reavis KM, Bisgaard N, Canlon B, Dubno JR, Frisina RD, Hertzano R, Humes LE, Mick P, Phillips NA, Pichora-Fuller MK, Shuster B, Singh G

Sex-Linked Biology and Gender-Related Research Is Essential to Advancing Hearing Health, Ear and hearing. 2022 Nov 17

Krysiak K, Danos AM, Saliba J, McMichael JF, Coffman AC, Kiwala S, Barnell EK, Sheta L, Grisdale CJ, Kujan L, Pema S, Lever J, Ridd S, Spies NC, Andric V, Chiorean A, Rieke DT, Clark KA, Reisle C, Venigalla AC, Evans M, Jani P, Takahashi H, Suda A, Horak P, Ritter DI, Zhou X, Ainscough BJ, Delong S, Kesserwan C, Lamping M, Shen H, Marr AR, Hoang MH, Singhal K, Khanfar M, Li BV, Lin WH, Terraf P, Corson LB, Salama Y, Campbell KM, Farncombe KM, Ji J, Zhao X, Xu X, Kanagal-Shamanna R, King I, Cotto KC, Skidmore ZL, Walker JR, Zhang J, Milosavljevic A, Patel RY, Giles RH, Kim RH, Schriml LM, Mardis ER, Jones SJM, Raca G, Rao S, Madhavan S, Wagner AH, Griffith M, Griffith OL

CIViCdb 2022: evolution of an open-access cancer variant interpretation knowledgebase, Nucleic acids research. 2022 Nov 14

Ament SA, Adkins RS, Carter R, Chrysostomou E, Colantuoni C, Crabtree J, Creasy HH, Degatano K, Felix V, Gandt P, Garden GA, Giglio M, Herb BR, Khajouei F, Kiernan E, McCracken C, McDaniel K, Nadendla S, Nickel L, Olley D, Orvis J, Receveur JP, Schor M, Sonthalia S, Tickle TL, Way J, Hertzano R, Mahurkar AA, White OR

The Neuroscience Multi-Omic Archive: a BRAIN Initiative resource for single-cell transcriptomic and epigenomic data from the mammalian brain, Nucleic acids research. 2022 Nov 01

France MT, Brown SE, Rompalo AM, Brotman RM, Ravel J

Identification of shared bacterial strains in the vaginal microbiota of related and unrelated reproductive-age mothers and daughters using genome-resolved metagenomics, PloS one. 2022 Oct 26

He Y, Yu H, Huffman A, Lin AY, Natale DA, Beverley J, Zheng L, Perl Y, Wang Z, Liu Y, Ong E, Wang Y, Huang P, Tran L, Du J, Shah Z, Shah E, Desai R, Huang HH, Tian Y, Merrell E, Duncan WD, Arabandi S, Schriml LM, Zheng J, Masci AM, Wang L, Liu H, Smaili FZ, Hoehndorf R, Pendlington ZM, Roncaglia P, Ye X, Xie J, Tang YW, Yang X, Peng S, Zhang L, Chen L, Hur J, Omenn GS, Athey B, Smith B

A comprehensive update on CIDO: the community-based coronavirus infectious disease ontology, Journal of biomedical semantics. 2022 Oct 21

Ryon KA, Tierney BT, Frolova A, Kahles A, Desnues C, Ouzounis C, Gibas C, Bezdan D, Deng Y, He D, Dias-Neto E, Elhaik E, Afshin E, Grills G, Iraola G, Suzuki H, Werner J, Udekwu K, Schriml L, Bhattacharyya M, Oliveira M, Zambrano MM, Hazrin-Chong NH, Osuolale O, Łabaj PP, Tiasse P, Rapuri S, Borras S, Pozdniakova S, Shi T, Sezerman U, Rodo X, Sezer ZH, Mason CE

A history of the MetaSUB consortium: Tracking urban microbes around the globe, iScience. 2022 Oct 20

Sun F, Zhao Z, Willoughby MM, Shen S, Zhou Y, Shao Y, Kang J, Chen Y, Chen M, Yuan X, Hamza I, Reddi AR, Chen C

HRG-9 homologues regulate haem trafficking from haem-enriched compartments, Nature. 2022 Oct 19

Miao Q, Li Q, Tan W, Mi Y, Ma B, Zhang J, Guo Z

Preparation, Anticoagulant and Antioxidant Properties of Glucosamine-Heparin Salt, Marine drugs. 2022 Oct 18

Ma Y, Zhang H, Lin R, Ai Y, Lan K, Duan L, Chen W, Duan X, Ma B, Wang C, Li X, Zhao D

Remodeling nanodroplets into hierarchical mesoporous silica nanoreactors with multiple chambers, Nature communications. 2022 Oct 17

Sikorski MJ, Ma J, Hazen TH, Desai SN, Tupua S, Nimarota-Brown S, Sialeipata M, Rambocus S, Ballard SA, Valcanis M, Thomsen RE, Robins-Browne RM, Howden BP, Naseri TK, Levine MM, Rasko DA

Spatial-temporal and phylogenetic analyses of epidemiologic data to help understand the modes of transmission of endemic typhoid fever in Samoa, PLoS neglected tropical diseases. 2022 Oct 17

Wang Y, Li H, Huang ZQ, Ma B, Yang YZ, Xiu ZH, Wang L, Tan BC

Maize PPR-E proteins mediate RNA C-to-U editing in mitochondria by recruiting the trans deaminase PCW1, The Plant cell. 2022 Oct 06

Li L, Li M, Wang M, Zhang L, Yu Y, Zhang J, Ma B, Wang W

A "Cell Space Station" for Spatiotemporal Molecular Manipulation of Immune Checkpoint, ACS nano. 2022 Oct 04

Adediran TY, Hitchcock S, Johnson JK, Stine OC, Leekha S, Thom KA, Liang Y, Rasko DA, Harris AD

Molecular concordance of methicillin-resistant isolates from healthcare workers and patients, Infection control and hospital epidemiology. 2022 Sep 30

Aggor FE, Bertolini M, Zhou C, Taylor TC, Abbott DA, Musgrove J, Bruno VM, Hand TW, Gaffen SL

A gut-oral microbiome-driven axis controls oropharyngeal candidiasis through retinoic acid, JCI insight. 2022 Sep 22

Ndungo E, Holm JB, Gama S, Buchwald AG, Tennant SM, Laufer MK, Pasetti MF, Rasko DA

Dynamics of the Gut Microbiome in -Infected Children during the First Two Years of Life, mSystems. 2022 Sep 19

Braccia DJ, Minabou Ndjite G, Weiss A, Levy S, Abeysinghe S, Jiang X, Pop M, Hall B

Gut Microbiome-Wide Search for Bacterial Azoreductases Reveals Potentially Uncharacterized Azoreductases Encoded in the Human Gut Microbiome, Drug metabolism and disposition: the biological fate of chemicals. 2022 Sep 18

Peng Y, Liu F, Qiao Y, Wang P, Ma B, Li L, Si C, Wang X, Zhang M, Song F

Association of Abnormal Bowel Health with Major Chronic Diseases and Risk of Mortality, Annals of epidemiology. 2022 Sep 15

O'Connor T, Javidi B

COVID-19 screening with digital holographic microscopy using intra-patient probability functions of spatio-temporal bio-optical attributes, Biomedical optics express. 2022 Sep 15

Zhang J, Ma B, Han X, Ding S, Li Y

Global, regional, and national burdens of HIV and other sexually transmitted infections in adolescents and young adults aged 10-24 years from 1990 to 2019: a trend analysis based on the Global Burden of Disease Study 2019, The Lancet. Child & adolescent health. 2022 Sep 12

Seneviratne C, Noel J, Franklin PD, Colloca L

Editorial: Harnessing placebo mechanisms, Frontiers in psychiatry. 2022 Sep 12

Sikorski MJ, Hazen TH, Desai SN, Nimarota-Brown S, Tupua S, Sialeipata M, Rambocus S, Ingle DJ, Duchene S, Ballard SA, Valcanis M, Zufan S, Ma J, Sahl JW, Maes M, Dougan G, Thomsen RE, Robins-Browne RM, Howden BP, Naseri TK, Levine MM, Rasko DA

Persistence of Rare Salmonella Typhi Genotypes Susceptible to First-Line Antibiotics in the Remote Islands of Samoa, mBio. 2022 Sep 12

Yu X, Wang Y, Zhang M, Ma H, Feng C, Zhang B, Wang X, Ma B, Yao Q, Wu C

3D Printing of Gear-inspired Biomaterials: Immunomodulation and Bone Regeneration, Acta biomaterialia. 2022 Sep 10

Nguyen MNL, Zhu C, Kolbe SC, Butzkueven H, White OB, Fielding J, Kilpatrick TJ, Egan GF, Klistorner A, van der Walt A

Early predictors of visual and axonal outcomes after acute optic neuritis, Frontiers in neurology. 2022 Sep 08

Casella AM, Colantuoni C, Ament SA

Identifying enhancer properties associated with genetic risk for complex traits using regulome-wide association studies, PLoS computational biology. 2022 Sep 07

Tessandier N, Uysal IB, Elie B, Selinger C, Bernat C, Boué V, Grasset S, Groc S, Rahmoun M, Reyné B, Bender N, Bonneau M, Graf C, Tribout V, Foulongne V, Ravel J, Waterboer T, Hirtz C, Bravo IG, Reynes J, Segondy M, Murall CL, Boulle N, Kamiya T, Alizon S

Does exposure to different types of menstrual protections affect the vaginal environment?, Molecular ecology. 2022 Sep 03

Seneviratne C, Gorelick DA, Lynch KG, Brown C, Romer D, Pond T, Kampman K, Kranzler HR

A randomized, double-blind, placebo-controlled, pharmacogenetic study of ondansetron for treating alcohol use disorder, Alcoholism, clinical and experimental research. 2022 Sep 02

Ai L, Ma B, Shao S, Zhang L, Zhang L

Heavy metals in Chinese freshwater fish: Levels, regional distribution, sources and health risk assessment, The Science of the total environment. 2022 Sep 02

Klinedinst NJ, Huang W, Nelson AK, Resnick B, Renn C, Kane MA, Dorsey SG

Protein Changes After 6 weeks of Walking and the Relationship to Pain in Adults with Knee Osteoarthritis, Biological research for nursing. 2022 Sep 01

Delgado-Diaz DJ, Jesaveluk B, Hayward JA, Tyssen D, Alisoltani A, Potgieter M, Bell L, Ross E, Iranzadeh A, Allali I, Dabee S, Barnabas S, Gamieldien H, Blackburn JM, Mulder N, Smith SB, Edwards VL, Burgener AD, Bekker LG, Ravel J, Passmore JS, Masson L, Hearps AC, Tachedjian G

Lactic acid from vaginal microbiota enhances cervicovaginal epithelial barrier integrity by promoting tight junction protein expression, Microbiome. 2022 Aug 31

Goedert JJ, Wu Z, Yonehara CH, Frankland TB, Sinha R, Jones GS, Wan Y, Ravel J, Zhao N, Honda SA

Reusing a prepaid health plan's fecal immunochemical tests for microbiome associations with colorectal adenoma, Scientific reports. 2022 Aug 31

Jaworek T, Xu H, Gaynor BJ, Cole JW, Rannikmae K, Stanne TM, Tomppo L, Abedi V, Amouyel P, Armstrong ND, Attia J, Bell S, Benavente OR, Boncoraglio GB, Butterworth A, , Carcel-Marquez J, Chen Z, Chong M, Cruchaga C, Cushman M, Danesh J, Debette S, Duggan DJ, Durda JP, Engstrom G, Enzinger C, Faul JD, Fecteau NS, Fernandez-Cadenas I, Gieger C, Giese AK, Grewal RP, Grittner U, Havulinna AS, Heitsch L, Hochberg MC, Holliday E, Hu J, Ilinca A, , Irvin MR, Jackson RD, Jacob MA, Janssen RR, Jimenez-Conde J, Johnson JA, Kamatani Y, Kardia SL, Koido M, Kubo M, Lange L, Lee JM, Lemmens R, Levi CR, Li J, Li L, Lin K, Lopez H, Luke S, Maguire J, McArdle PF, McDonough CW, Meschia JF, Metso T, Muller-Nurasyid M, O'Connor TD, O'Donnell M, Peddareddygari LR, Pera J, Perry JA, Peters A, Putaala J, Ray D, Rexrode K, Ribases M, Rosand J, Rothwell PM, Rundek T, Ryan KA, Sacco RL, Salomaa V, Sanchez-Mora C, Schmidt R, Sharma P, Slowik A, Smith JA, Smith NL, Wassertheil-Smoller S, Soederholm M, Stine OC, Strbian D, Sudlow CL, Tatlisumak T, Terao C, Thijs V, Torres-Aguila NP, Tregouet DA, Tuladhar AM, Veldink JH, Walters RG, Weir DR, Woo D, Worrall BB, Hong CC, Ross O, Zand R, Leeuw FE, Lindgren AG, Pare G, Anderson CD, Markus HS, Jern C, Malik R, Dichgans M, Mitchell BD, Kittner SJ,

Contribution of Common Genetic Variants to Risk of Early Onset Ischemic Stroke, Neurology. 2022 Aug 31

Liu X, Yang Y, Ma X, Wang X, Ma B, Li S

The Effect of CT-Guided Artificial Pneumothorax plus Thoracoscopy and Central Venous Catheterization on the Drainage Effect of Pediatric Empyema and Pulmonary Function, Contrast media & molecular imaging. 2022 Aug 30

Fox ME, Wulff AB, Franco D, Choi EY, Calarco CA, Engeln M, Turner MD, Chandra R, Rhodes VM, Thompson SM, Ament SA, Lobo MK

Adaptations in Nucleus Accumbens Neuron Subtypes Mediate Negative Affective Behaviors in Fentanyl Abstinence, Biological psychiatry. 2022 Aug 30

Duan L, Hung CT, Wang J, Wang C, Ma B, Zhang W, Ma Y, Zhao Z, Yang C, Zhao T, Peng L, Liu D, Zhao D, Li W

Synthesis of Fully Exposed Single-Atom-Layer Metal Clusters on 2D Ordered Mesoporous TiO2 Nanosheets, Angewandte Chemie (International ed. in English). 2022 Aug 29

Cornell J, Conchas A, Wang XQ, Fink JC, Chen H, Kane MA, Pilli N, Ait-Daoud N, Gorelick DA, Li MD, Johnson BA, Seneviratne C

Validation of serotonin transporter mRNA as a quantitative biomarker of heavy drinking and its comparison to ethyl glucuronide/ethyl sulfate: A randomized, double-blind, crossover trial, Alcoholism, clinical and experimental research. 2022 Aug 28

Adediran T, Hitchcock S, O'Hara LM, Michalski JM, Johnson JK, Calfee DP, Miller LG, Hazen TH, Harris AD, Rasko DA

Erratum for Adediran et al., "Comparative Genomics Identifies Features Associated with Methicillin-Resistant Staphylococcus aureus (MRSA) Transmission in Hospital Settings", mSphere. 2022 Aug 24

Uysal IB, Boué V, Murall CL, Graf C, Selinger C, Hirtz C, Bernat C, Ravel J, Reynes J, Bonneau M, Rahmoun M, Segondy M, Boulle N, Grasset S, Groc S, Waterboer T, Tribout V, Bravo IG, Burrel S, Foulongne V, Alizon S, Tessandier N

Concomitant and productive genital infections by HSV-2 and HPV in two young women: A case report, IDCases. 2022 Aug 19

Cornell J, Taj A, Sivinski J, Yin M, Bhatia P, Oula D, Fatschel S, Franklin P, Noel J, Colloca L, Seneviratne C

Integration of virtual platforms for enhanced conference experience: Data-based evidence from the Society of Interdisciplinary Placebo Studies 2021 conference, Frontiers in communication. 2022 Aug 18

Adediran T, Hitchcock S, O'Hara LM, Michalski JM, Johnson JK, Calfee DP, Miller LG, Hazen TH, Harris AD, Rasko DA

Erratum for Adediran et al., "Examination of Staphylococcus aureus Isolates from the Gloves and Gowns of Intensive Care Unit Health Care Workers", Microbiology resource announcements. 2022 Aug 08

Adediran T, Hitchcock S, O'Hara LM, Michalski JM, Johnson JK, Calfee DP, Miller LG, Hazen TH, Rasko DA, Harris AD

Erratum for Adediran et al., "Examination of 388 Staphylococcus aureus Isolates from Intensive Care Unit Patients", Microbiology resource announcements. 2022 Aug 08

Buskirk AD, Ndungo E, Shimanovich AA, Lam D, Blackwelder WC, Ikumapayi UN, Ma B, Powell H, Antonio M, Nataro JP, Kaper JB, Pasetti MF

Mucosal Immune Profiles Associated with Diarrheal Disease Severity in - and Enteropathogenic Escherichia coli-Infected Children Enrolled in the Global Enteric Multicenter Study, mBio. 2022 Aug 04

Edwards VL, McComb E, Gleghorn JP, Forney L, Bavoil PM, Ravel J

Three-dimensional models of the cervicovaginal epithelia to study host-microbiome interactions and sexually transmitted infections, Pathogens and disease. 2022 Aug 04

Podlesny D, Durdevic M, Paramsothy S, Kaakoush NO, Högenauer C, Gorkiewicz G, Walter J, Fricke WF

Identification of clinical and ecological determinants of strain engraftment after fecal microbiota transplantation using metagenomics, Cell reports. Medicine. 2022 Aug 03

Nguyen MNL, van der Walt A, Fielding J, Clough M, White OB, Costello F, Prasad S

Tracking Eye Movements for Diagnosis in Myasthenia Gravis: A Comprehensive Review, Journal of neuro-ophthalmology : the official journal of the North American Neuro-Ophthalmology Society. 2022 Aug 02

Wang L, Xu Y, Zhao Z, Zhang D, Lin X, Ma B, Zhang H

Analysis of Pyrolysis Characteristics of Oily Sludge in Different Regions and Environmental Risk Assessment of Heavy Metals in Pyrolysis Residue, ACS omega. 2022 Jul 22

Divers TJ, Mongodin EF, Miller CB, Belgrave RL, Gardner RB, Fraser CM, Schutzer SE

Genomic hybrid capture assay to detect : an application to diagnose neuroborreliosis in horses, Journal of veterinary diagnostic investigation : official publication of the American Association of Veterinary Laboratory Diagnosticians, Inc. 2022 Jul 21

Qiao Y, Liu F, Peng Y, Wang P, Ma B, Li L, Si C, Wang X, Zhang M, Song F

Association of serum Klotho levels with cancer and cancer mortality: Evidence from National Health and Nutrition Examination Survey, Cancer medicine. 2022 Jul 16

Orvis J, Albertin CB, Shrestha P, Chen S, Zheng M, Rodriguez CJ, Tallon LJ, Mahurkar A, Zimin AV, Kim M, Liu K, Kandel ER, Fraser CM, Sossin W, Abrams TW

The evolution of synaptic and cognitive capacity: Insights from the nervous system transcriptome of , Proceedings of the National Academy of Sciences of the United States of America. 2022 Jul 08

Bailey MD, Gambert S, Gruber-Baldini A, Guralnik J, Kozar R, Qato D, Shardell M, Albrecht JS

Traumatic Brain Injury and Risk of Long-Term Nursing Home Entry among Older Adults: An Analysis of Medicare Administrative Claims Data, Journal of neurotrauma. 2022 Jul 06

France MT, Clifford J, Narina S, Rutt L, Ravel J

Complete Genome Sequences of Ezakiella coagulans C0061C1 and Fenollaria massiliensis C0061C2, Microbiology resource announcements. 2022 Jul 05

Tebben K, Dia A, Serre D

Determination of the Stage Composition of Infections from Bulk Gene Expression Data, mSystems. 2022 Jul 05

White OB, Fielding J, Pelak VS, Schankin CJ

Corrigendum: Editorial: Visual Snow: Old Problem, New Understanding, Frontiers in neurology. 2022 Jul 01

Zhang X, Xu L, Chen H, Zhang X, Lei Y, Liu W, Xu H, Ma B, Zhu C

Novel Hydroxychalcone-Based Dual Inhibitors of Aldose Reductase and α-Glucosidase as Potential Therapeutic Agents against Diabetes Mellitus and Its Complications, Journal of medicinal chemistry. 2022 Jun 24

Tyssen D, Hearps AC, Guntur K, Masson L, Cook S, Moulton SE, Ravel J, Bradshaw CS, Ayehunie S, Tachedjian G

The Impact of Over-The-Counter Lactic Acid Containing Vaginal Gels on the Integrity and Inflammatory State of the Vaginal Epithelium , Frontiers in reproductive health. 2022 Jun 23

Kamle S, Ma B, Lee CM, Schor G, Zhou Y, Lee CG, Elias JA

Host Chitinase 3-like-1 is a universal therapeutic target for SARS-CoV-2 viral variants in COVID-19, eLife. 2022 Jun 23

Strik M, Clough M, Solly EJ, Glarin R, White OB, Kolbe SC, Fielding J

Microstructure in patients with visual snow syndrome: an ultra-high field morphological and quantitative MRI study, Brain communications. 2022 Jun 23

Tamarelle J, Shardell MD, Ravel J, Brotman RM

Factors Associated With Incidence and Spontaneous Clearance of Molecular-Bacterial Vaginosis: Results From a Longitudinal Frequent-Sampling Observational Study, Sexually transmitted diseases. 2022 Jun 21

Loesch DP, Horimoto ARVR, Sarihan EI, Inca-Martinez M, Mason E, Cornejo-Olivas M, Torres L, Mazzetti P, Cosentino C, Sarapura-Castro E, Rivera-Valdivia A, Medina AC, Dieguez E, Raggio V, Lescano A, Tumas V, Borges V, Ferraz HB, Rieder CR, Schumacher-Schuh A, Santos-Lobato BL, Velez-Pardo C, Jimenez-Del-Rio M, Lopera F, Moreno S, Chana-Cuevas P, Fernandez W, Arboleda G, Arboleda H, Arboleda-Bustos CE, Yearout D, Zabetian CP, , Thornton TA, Mata IF, O'Connor TD,

Polygenic risk prediction and SNCA haplotype analysis in a Latino Parkinson's disease cohort, Parkinsonism & related disorders. 2022 Jun 18

Zhang YC, Lyu ZY, Ma B, Li LM, Wang W, Sheng C, Dai HJ, Huang YB, Song FF, Song FJ, Chen KX

A new risk stratification strategy for fatty liver disease by incorporating MAFLD and fibrosis score in a large US population, Hepatology international. 2022 Jun 14

Ma B, Sundararajan S, Nadimpalli G, France M, McComb E, Rutt L, Lemme-Dumit JM, Janofsky E, Roskes LS, Gajer P, Fu L, Yang H, Humphrys M, Tallon LJ, Sadzewicz L, Pasetti MF, Ravel J, Viscardi RM

Highly Specialized Carbohydrate Metabolism Capability in Strains Associated with Intestinal Barrier Maturation in Early Preterm Infants, mBio. 2022 Jun 13

Ma J, Wu J, Zhang H, Du L, Zhuang H, Zhang Z, Ma B, Chang J, Wu C

3D Printing of Diatomite Incorporated Composite Scaffolds for Skin Repair of Deep Burn Wounds, International journal of bioprinting. 2022 Jun 11

Fricke WF, Ravel J

More data needed on neonatal microbiome seeding, Microbiome. 2022 Jun 10

Gao Z, Ma B, Chen S, Tian J, Zhao C

Converting waste PET plastics into automobile fuels and antifreeze components, Nature communications. 2022 Jun 10

Dias JP, Carlson O, Schweitzer M, Shardell M, Clark JM, Brown TT, Egan JM, Lee CJ

GDF15 and Cortisol Response to Meal Tolerance Test in Post-Sleeve Gastrectomy Patients with Weight Regain, Obesity surgery. 2022 Jun 08

Taiber S, Gwilliam K, Hertzano R, Avraham KB

The Genomics of Auditory Function and Disease, Annual review of genomics and human genetics. 2022 Jun 06

Yang Z, Liao J, Schumaker L, Carter-Cooper B, Lapidus RG, Fan X, Gaykalova DA, Mehra R, Cullen KJ, Dan H

Simultaneously targeting ErbB family kinases and PI3K in HPV-positive head and neck squamous cell carcinoma, Oral oncology. 2022 Jun 03

Tvedte ES, Gasser M, Zhao X, Tallon LJ, Sadzewicz L, Bromley RE, Chung M, Mattick J, Sparklin BC, Dunning Hotopp JC

Accumulation of endosymbiont genomes in an insect autosome followed by endosymbiont replacement, Current biology : CB. 2022 May 31

Brown SE, He X, Shardell MD, Ravel J, Ghanem KG, Zenilman JM, Brotman RM

Douching cessation and molecular bacterial vaginosis: a reanalysis of archived specimens, Sexually transmitted infections. 2022 May 30

Durski M, Ravel J, Spautz ACPG, Carvalho NS, Silva MG, Marconi C

Comparison of two microscopic interpretations of vaginal microbiota with molecular profiling, Diagnostic microbiology and infectious disease. 2022 May 26

Clough M, Bartholomew J, White OB, Fielding J

Working Memory Phenotypes in Early Multiple Sclerosis: Appraisal of Phenotype Frequency, Progression and Test Sensitivity, Journal of clinical medicine. 2022 May 23

Gerson KD, Anton L, Ferguson B, Ravel J, Burris HH, Elovitz MA

Gardnerella vaginalis induces matrix metalloproteinases in the cervicovaginal epithelium through TLR-2 activation, Journal of reproductive immunology. 2022 May 23

Price JT, Vwalika B, France M, Ravel J, Ma B, Mwape H, Rittenhouse KJ, De Paris K, Hobbs M, Nelson JA, Kasaro MP, Stringer EM, Stringer JSA

HIV-associated vaginal microbiome and inflammation predict spontaneous preterm birth in Zambia, Scientific reports. 2022 May 20

Shardell M, Speiser JL

Waste Not, Want Not: Proper Design, Analysis, and Interpretation Are Essential to Advancing Aging Research Across the Translational Science Spectrum, The journals of gerontology. Series A, Biological sciences and medical sciences. 2022 May 19

Adedrian T, Hitchcock S, O'Hara LM, Michalski JM, Johnson JK, Calfee DP, Miller LG, Hazen TH, Harris AD, Rasko DA

Comparative Genomics Identifies Features Associated with Methicillin-Resistant Staphylococcus aureus (MRSA) Transmission in Hospital Settings, mSphere. 2022 May 17

Mocci E, Goto T, Chen J, Ament S, Traub RJ, Dorsey SG

Early and Late Transcriptional Changes in Blood, Neural, and Colon Tissues in Rat Models of Stress-Induced and Comorbid Pain Hypersensitivity Reveal Regulatory Roles in Neurological Disease, Frontiers in pain research (Lausanne, Switzerland). 2022 May 17

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Targeting Chitinase 1 and Chitinase 3-Like 1 as Novel Therapeutic Strategy of Pulmonary Fibrosis, Frontiers in pharmacology. 2022 Mar 17

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Shao S, Ma B, Ai L, Tian X, Zhang L

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Bengtsson RJ, Simpkin AJ, Pulford CV, Low R, Rasko DA, Rigden DJ, Hall N, Barry EM, Tennant SM, Baker KS

Pathogenomic analyses of Shigella isolates inform factors limiting shigellosis prevention and control across LMICs, Nature microbiology. 2022 Jan 31

Weaver KR, Griffioen MA, Klinedinst NJ, Galik E, Duarte AC, Colloca L, Resnick B, Dorsey SG, Renn CL

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Kamle S, Ma B, Lee CM, Schor G, Lee CG, Elias JA

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The Effect of Gender-Affirming Medical Care on the Vaginal and Neovaginal Microbiomes of Transgender and Gender-Diverse People, Frontiers in cellular and infection microbiology. 2022 Jan 21

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Ding J, Ma B, Wei X, Li Y

Detection of by 16S Ribosomal RNA Gene PCR and Metagenomic Next-Generation Sequencing (mNGS), Frontiers in cellular and infection microbiology. 2022 Jan 07

Zhou AE, Shah ZV, Bradwell KR, Munro JB, Berry AA, Serre D, Takala-Harrison S, O'Connor TD, Silva JC, Travassos MA

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The use of machine learning to discover regulatory networks controlling biological systems, Molecular cell. 2022 Jan 04

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