Publications - Publications 2022

Aggor FE, Bertolini M, Zhou C, Taylor TC, Abbott DA, Musgrove J, Bruno VM, Hand TW, Gaffen SL

A gut-oral microbiome-driven axis controls oropharyngeal candidiasis through retinoic acid, JCI insight. 2022 Sep 22

Ndungo E, Holm JB, Gama S, Buchwald AG, Tennant SM, Laufer MK, Pasetti MF, Rasko DA

Dynamics of the Gut Microbiome in -Infected Children during the First Two Years of Life, mSystems. 2022 Sep 19

Peng Y, Liu F, Qiao Y, Wang P, Ma B, Li L, Si C, Wang X, Zhang M, Song F

Association of Abnormal Bowel Health with Major Chronic Diseases and Risk of Mortality, Annals of epidemiology. 2022 Sep 15

Zhang J, Ma B, Han X, Ding S, Li Y

Global, regional, and national burdens of HIV and other sexually transmitted infections in adolescents and young adults aged 10-24 years from 1990 to 2019: a trend analysis based on the Global Burden of Disease Study 2019, The Lancet. Child & adolescent health. 2022 Sep 12

Sikorski MJ, Hazen TH, Desai SN, Nimarota-Brown S, Tupua S, Sialeipata M, Rambocus S, Ingle DJ, Duchene S, Ballard SA, Valcanis M, Zufan S, Ma J, Sahl JW, Maes M, Dougan G, Thomsen RE, Robins-Browne RM, Howden BP, Naseri TK, Levine MM, Rasko DA

Persistence of Rare Salmonella Typhi Genotypes Susceptible to First-Line Antibiotics in the Remote Islands of Samoa, mBio. 2022 Sep 12

Yu X, Wang Y, Zhang M, Ma H, Feng C, Zhang B, Wang X, Ma B, Yao Q, Wu C

3D Printing of Gear-inspired Biomaterials: Immunomodulation and Bone Regeneration, Acta biomaterialia. 2022 Sep 10

Casella AM, Colantuoni C, Ament SA

Identifying enhancer properties associated with genetic risk for complex traits using regulome-wide association studies, PLoS computational biology. 2022 Sep 07

Tessandier N, Uysal IB, Elie B, Selinger C, Bernat C, Boué V, Grasset S, Groc S, Rahmoun M, Reyné B, Bender N, Bonneau M, Graf C, Tribout V, Foulongne V, Ravel J, Waterboer T, Hirtz C, Bravo IG, Reynes J, Segondy M, Murall CL, Boulle N, Kamiya T, Alizon S

Does exposure to different types of menstrual protections affect the vaginal environment?, Molecular ecology. 2022 Sep 03

Seneviratne C, Gorelick DA, Lynch KG, Brown C, Romer D, Pond T, Kampman K, Kranzler HR

A randomized, double-blind, placebo-controlled, pharmacogenetic study of ondansetron for treating alcohol use disorder, Alcoholism, clinical and experimental research. 2022 Sep 02

Ai L, Ma B, Shao S, Zhang L, Zhang L

Heavy metals in Chinese freshwater fish: Levels, regional distribution, sources and health risk assessment, The Science of the total environment. 2022 Sep 02

Klinedinst NJ, Huang W, Nelson AK, Resnick B, Renn C, Kane MA, Dorsey SG

Protein Changes After 6 weeks of Walking and the Relationship to Pain in Adults with Knee Osteoarthritis, Biological research for nursing. 2022 Sep 01

Delgado-Diaz DJ, Jesaveluk B, Hayward JA, Tyssen D, Alisoltani A, Potgieter M, Bell L, Ross E, Iranzadeh A, Allali I, Dabee S, Barnabas S, Gamieldien H, Blackburn JM, Mulder N, Smith SB, Edwards VL, Burgener AD, Bekker LG, Ravel J, Passmore JS, Masson L, Hearps AC, Tachedjian G

Lactic acid from vaginal microbiota enhances cervicovaginal epithelial barrier integrity by promoting tight junction protein expression, Microbiome. 2022 Aug 31

Goedert JJ, Wu Z, Yonehara CH, Frankland TB, Sinha R, Jones GS, Wan Y, Ravel J, Zhao N, Honda SA

Reusing a prepaid health plan's fecal immunochemical tests for microbiome associations with colorectal adenoma, Scientific reports. 2022 Aug 31

Liu X, Yang Y, Ma X, Wang X, Ma B, Li S

The Effect of CT-Guided Artificial Pneumothorax plus Thoracoscopy and Central Venous Catheterization on the Drainage Effect of Pediatric Empyema and Pulmonary Function, Contrast media & molecular imaging. 2022 Aug 30

Duan L, Hung CT, Wang J, Wang C, Ma B, Zhang W, Ma Y, Zhao Z, Yang C, Zhao T, Peng L, Liu D, Zhao D, Li W

Synthesis of Fully Exposed Single-Atom-Layer Metal Clusters on 2D Ordered Mesoporous TiO2 Nanosheets, Angewandte Chemie (International ed. in English). 2022 Aug 29

Cornell J, Conchas A, Wang XQ, Fink JC, Chen H, Kane MA, Pilli N, Ait-Daoud N, Gorelick DA, Li MD, Johnson BA, Seneviratne C

Validation of serotonin transporter mRNA as a quantitative biomarker of heavy drinking and its comparison to ethyl glucuronide/ethyl sulfate: A randomized, double-blind, crossover trial, Alcoholism, clinical and experimental research. 2022 Aug 28

Adediran T, Hitchcock S, O'Hara LM, Michalski JM, Johnson JK, Calfee DP, Miller LG, Hazen TH, Harris AD, Rasko DA

Erratum for Adediran et al., "Comparative Genomics Identifies Features Associated with Methicillin-Resistant Staphylococcus aureus (MRSA) Transmission in Hospital Settings", mSphere. 2022 Aug 24

Uysal IB, Boué V, Murall CL, Graf C, Selinger C, Hirtz C, Bernat C, Ravel J, Reynes J, Bonneau M, Rahmoun M, Segondy M, Boulle N, Grasset S, Groc S, Waterboer T, Tribout V, Bravo IG, Burrel S, Foulongne V, Alizon S, Tessandier N

Concomitant and productive genital infections by HSV-2 and HPV in two young women: A case report, IDCases. 2022 Aug 19

Cornell J, Taj A, Sivinski J, Yin M, Bhatia P, Oula D, Fatschel S, Franklin P, Noel J, Colloca L, Seneviratne C

Integration of virtual platforms for enhanced conference experience: Data-based evidence from the Society of Interdisciplinary Placebo Studies 2021 conference, Frontiers in communication. 2022 Aug 18

Adediran T, Hitchcock S, O'Hara LM, Michalski JM, Johnson JK, Calfee DP, Miller LG, Hazen TH, Harris AD, Rasko DA

Erratum for Adediran et al., "Examination of Staphylococcus aureus Isolates from the Gloves and Gowns of Intensive Care Unit Health Care Workers", Microbiology resource announcements. 2022 Aug 08

Adediran T, Hitchcock S, O'Hara LM, Michalski JM, Johnson JK, Calfee DP, Miller LG, Hazen TH, Rasko DA, Harris AD

Erratum for Adediran et al., "Examination of 388 Staphylococcus aureus Isolates from Intensive Care Unit Patients", Microbiology resource announcements. 2022 Aug 08

Buskirk AD, Ndungo E, Shimanovich AA, Lam D, Blackwelder WC, Ikumapayi UN, Ma B, Powell H, Antonio M, Nataro JP, Kaper JB, Pasetti MF

Mucosal Immune Profiles Associated with Diarrheal Disease Severity in - and Enteropathogenic Escherichia coli-Infected Children Enrolled in the Global Enteric Multicenter Study, mBio. 2022 Aug 04

Edwards VL, McComb E, Gleghorn JP, Forney L, Bavoil PM, Ravel J

Three-dimensional models of the cervicovaginal epithelia to study host-microbiome interactions and sexually transmitted infections, Pathogens and disease. 2022 Aug 04

Podlesny D, Durdevic M, Paramsothy S, Kaakoush NO, Högenauer C, Gorkiewicz G, Walter J, Fricke WF

Identification of clinical and ecological determinants of strain engraftment after fecal microbiota transplantation using metagenomics, Cell reports. Medicine. 2022 Aug 03

Nguyen MNL, van der Walt A, Fielding J, Clough M, White OB, Costello F, Prasad S

Tracking Eye Movements for Diagnosis in Myasthenia Gravis: A Comprehensive Review, Journal of neuro-ophthalmology : the official journal of the North American Neuro-Ophthalmology Society. 2022 Aug 02

Wang L, Xu Y, Zhao Z, Zhang D, Lin X, Ma B, Zhang H

Analysis of Pyrolysis Characteristics of Oily Sludge in Different Regions and Environmental Risk Assessment of Heavy Metals in Pyrolysis Residue, ACS omega. 2022 Jul 22

Divers TJ, Mongodin EF, Miller CB, Belgrave RL, Gardner RB, Fraser CM, Schutzer SE

Genomic hybrid capture assay to detect : an application to diagnose neuroborreliosis in horses, Journal of veterinary diagnostic investigation : official publication of the American Association of Veterinary Laboratory Diagnosticians, Inc. 2022 Jul 21

Qiao Y, Liu F, Peng Y, Wang P, Ma B, Li L, Si C, Wang X, Zhang M, Song F

Association of serum Klotho levels with cancer and cancer mortality: Evidence from National Health and Nutrition Examination Survey, Cancer medicine. 2022 Jul 16

Orvis J, Albertin CB, Shrestha P, Chen S, Zheng M, Rodriguez CJ, Tallon LJ, Mahurkar A, Zimin AV, Kim M, Liu K, Kandel ER, Fraser CM, Sossin W, Abrams TW

The evolution of synaptic and cognitive capacity: Insights from the nervous system transcriptome of , Proceedings of the National Academy of Sciences of the United States of America. 2022 Jul 08

Bailey MD, Gambert S, Gruber-Baldini A, Guralnik J, Kozar R, Qato D, Shardell M, Albrecht JS

Traumatic Brain Injury and Risk of Long-Term Nursing Home Entry among Older Adults: An Analysis of Medicare Administrative Claims Data, Journal of neurotrauma. 2022 Jul 06

France MT, Clifford J, Narina S, Rutt L, Ravel J

Complete Genome Sequences of Ezakiella coagulans C0061C1 and Fenollaria massiliensis C0061C2, Microbiology resource announcements. 2022 Jul 05

Tebben K, Dia A, Serre D

Determination of the Stage Composition of Infections from Bulk Gene Expression Data, mSystems. 2022 Jul 05

White OB, Fielding J, Pelak VS, Schankin CJ

Corrigendum: Editorial: Visual Snow: Old Problem, New Understanding, Frontiers in neurology. 2022 Jul 01

Zhang X, Xu L, Chen H, Zhang X, Lei Y, Liu W, Xu H, Ma B, Zhu C

Novel Hydroxychalcone-Based Dual Inhibitors of Aldose Reductase and α-Glucosidase as Potential Therapeutic Agents against Diabetes Mellitus and Its Complications, Journal of medicinal chemistry. 2022 Jun 24

Kamle S, Ma B, Lee CM, Schor G, Zhou Y, Lee CG, Elias JA

Host Chitinase 3-like-1 is a universal therapeutic target for SARS-CoV-2 viral variants in COVID-19, eLife. 2022 Jun 23

Strik M, Clough M, Solly EJ, Glarin R, White OB, Kolbe SC, Fielding J

Microstructure in patients with visual snow syndrome: an ultra-high field morphological and quantitative MRI study, Brain communications. 2022 Jun 23

Tamarelle J, Shardell MD, Ravel J, Brotman RM

Factors Associated With Incidence and Spontaneous Clearance of Molecular-Bacterial Vaginosis: Results From a Longitudinal Frequent-Sampling Observational Study, Sexually transmitted diseases. 2022 Jun 21

Loesch DP, Horimoto ARVR, Sarihan EI, Inca-Martinez M, Mason E, Cornejo-Olivas M, Torres L, Mazzetti P, Cosentino C, Sarapura-Castro E, Rivera-Valdivia A, Medina AC, Dieguez E, Raggio V, Lescano A, Tumas V, Borges V, Ferraz HB, Rieder CR, Schumacher-Schuh A, Santos-Lobato BL, Velez-Pardo C, Jimenez-Del-Rio M, Lopera F, Moreno S, Chana-Cuevas P, Fernandez W, Arboleda G, Arboleda H, Arboleda-Bustos CE, Yearout D, Zabetian CP, , Thornton TA, Mata IF, O'Connor TD,

Polygenic risk prediction and SNCA haplotype analysis in a Latino Parkinson's disease cohort, Parkinsonism & related disorders. 2022 Jun 18

Zhang YC, Lyu ZY, Ma B, Li LM, Wang W, Sheng C, Dai HJ, Huang YB, Song FF, Song FJ, Chen KX

A new risk stratification strategy for fatty liver disease by incorporating MAFLD and fibrosis score in a large US population, Hepatology international. 2022 Jun 14

Ma B, Sundararajan S, Nadimpalli G, France M, McComb E, Rutt L, Lemme-Dumit JM, Janofsky E, Roskes LS, Gajer P, Fu L, Yang H, Humphrys M, Tallon LJ, Sadzewicz L, Pasetti MF, Ravel J, Viscardi RM

Highly Specialized Carbohydrate Metabolism Capability in Strains Associated with Intestinal Barrier Maturation in Early Preterm Infants, mBio. 2022 Jun 13

Ma J, Wu J, Zhang H, Du L, Zhuang H, Zhang Z, Ma B, Chang J, Wu C

3D Printing of Diatomite Incorporated Composite Scaffolds for Skin Repair of Deep Burn Wounds, International journal of bioprinting. 2022 Jun 11

Fricke WF, Ravel J

More data needed on neonatal microbiome seeding, Microbiome. 2022 Jun 10

Gao Z, Ma B, Chen S, Tian J, Zhao C

Converting waste PET plastics into automobile fuels and antifreeze components, Nature communications. 2022 Jun 10

Dias JP, Carlson O, Schweitzer M, Shardell M, Clark JM, Brown TT, Egan JM, Lee CJ

GDF15 and Cortisol Response to Meal Tolerance Test in Post-Sleeve Gastrectomy Patients with Weight Regain, Obesity surgery. 2022 Jun 08

Taiber S, Gwilliam K, Hertzano R, Avraham KB

The Genomics of Auditory Function and Disease, Annual review of genomics and human genetics. 2022 Jun 06

Yang Z, Liao J, Schumaker L, Carter-Cooper B, Lapidus RG, Fan X, Gaykalova DA, Mehra R, Cullen KJ, Dan H

Simultaneously targeting ErbB family kinases and PI3K in HPV-positive head and neck squamous cell carcinoma, Oral oncology. 2022 Jun 03

Tvedte ES, Gasser M, Zhao X, Tallon LJ, Sadzewicz L, Bromley RE, Chung M, Mattick J, Sparklin BC, Dunning Hotopp JC

Accumulation of endosymbiont genomes in an insect autosome followed by endosymbiont replacement, Current biology : CB. 2022 May 31

Brown SE, He X, Shardell MD, Ravel J, Ghanem KG, Zenilman JM, Brotman RM

Douching cessation and molecular bacterial vaginosis: a reanalysis of archived specimens, Sexually transmitted infections. 2022 May 30

Durski M, Ravel J, Spautz ACPG, Carvalho NS, Silva MG, Marconi C

Comparison of two microscopic interpretations of vaginal microbiota with molecular profiling, Diagnostic microbiology and infectious disease. 2022 May 26

Clough M, Bartholomew J, White OB, Fielding J

Working Memory Phenotypes in Early Multiple Sclerosis: Appraisal of Phenotype Frequency, Progression and Test Sensitivity, Journal of clinical medicine. 2022 May 23

Gerson KD, Anton L, Ferguson B, Ravel J, Burris HH, Elovitz MA

Gardnerella vaginalis induces matrix metalloproteinases in the cervicovaginal epithelium through TLR-2 activation, Journal of reproductive immunology. 2022 May 23

Price JT, Vwalika B, France M, Ravel J, Ma B, Mwape H, Rittenhouse KJ, De Paris K, Hobbs M, Nelson JA, Kasaro MP, Stringer EM, Stringer JSA

HIV-associated vaginal microbiome and inflammation predict spontaneous preterm birth in Zambia, Scientific reports. 2022 May 20

Shardell M, Speiser JL

Waste Not, Want Not: Proper Design, Analysis, and Interpretation Are Essential to Advancing Aging Research Across the Translational Science Spectrum, The journals of gerontology. Series A, Biological sciences and medical sciences. 2022 May 19

Adedrian T, Hitchcock S, O'Hara LM, Michalski JM, Johnson JK, Calfee DP, Miller LG, Hazen TH, Harris AD, Rasko DA

Comparative Genomics Identifies Features Associated with Methicillin-Resistant Staphylococcus aureus (MRSA) Transmission in Hospital Settings, mSphere. 2022 May 17

Mocci E, Goto T, Chen J, Ament S, Traub RJ, Dorsey SG

Early and Late Transcriptional Changes in Blood, Neural, and Colon Tissues in Rat Models of Stress-Induced and Comorbid Pain Hypersensitivity Reveal Regulatory Roles in Neurological Disease, Frontiers in pain research (Lausanne, Switzerland). 2022 May 17

Trpchevska N, Freidin MB, Broer L, Oosterloo BC, Yao S, Zhou Y, Vona B, Bishop C, Bizaki-Vallaskangas A, Canlon B, Castellana F, Chasman DI, Cherny S, Christensen K, Concas MP, Correa A, Elkon R, , Mengel-From J, Gao Y, Giersch ABS, Girotto G, Gudjonsson A, Gudnason V, Heard-Costa NL, Hertzano R, Hjelmborg JVB, Hjerling-Leffler J, Hoffman HJ, Kaprio J, Kettunen J, Krebs K, Kähler AK, Lallemend F, Launer LJ, Lee IM, Leonard H, Li CM, Lowenheim H, Magnusson PKE, van Meurs J, Milani L, Morton CC, Mäkitie A, Nalls MA, Nardone GG, Nygaard M, Palviainen T, Pratt S, Quaranta N, Rämö J, Saarentaus E, Sardone R, Satizabal Barrera CL, Schweinfurth JM, Seshadri S, Shiroma E, Shulman E, Simonsick E, Spankovich C, Tropitzsch A, Lauschke VM, Sullivan PF, Goedegebure A, Cederroth CR, Williams FMK, Nagtegaal AP

Genome-wide association meta-analysis identifies 48 risk variants and highlights the role of the stria vascularis in hearing loss, American journal of human genetics. 2022 May 12

Hasin N, Riggs LM, Shekhtman T, Ashworth J, Lease R, Oshone RT, Humphries EM, Badner JA, Thomson PA, Glahn DC, Craig DW, Edenberg HJ, Gershon ES, McMahon FJ, Nurnberger JI, Zandi PP, Kelsoe JR, Roach JC, Gould TD, Ament SA

Rare variants implicate NMDA receptor signaling and cerebellar gene networks in risk for bipolar disorder, Molecular psychiatry. 2022 May 11

Ford H, Fraser CL, Solly E, Clough M, Fielding J, White O, Van Der Walt A

Hallucinogenic Persisting Perception Disorder: A Case Series and Review of the Literature, Frontiers in neurology. 2022 May 06

Meeker TJ, Schmid AC, Keaser ML, Khan SA, Gullapalli RP, Dorsey SG, Greenspan JD, Seminowicz DA

Tonic pain alters functional connectivity of the descending pain modulatory network involving amygdala, periaqueductal gray, parabrachial nucleus and anterior cingulate cortex, NeuroImage. 2022 May 03

Hurník P, Chyra Z, Ševčíková T, Štembírek J, Trtková KS, Gaykalova DA, Buchtová M, Hrubá E

Epigenetic Regulations of Perineural Invasion in Head and Neck Squamous Cell Carcinoma, Frontiers in genetics. 2022 Apr 27

Gerson KD, Yang N, Anton L, Levy M, Ravel J, Elovitz MA, Burris HH

Second trimester short cervix is associated with decreased abundance of cervicovaginal lipid metabolites, American journal of obstetrics and gynecology. 2022 Apr 22

White OB, Fielding J, Pelak VS, Schankin CJ

Editorial: Visual Snow: Old Problem, New Understanding, Frontiers in neurology. 2022 Apr 15

Kleckner AS, Kleckner IR, Culakova E, Wojtovich AP, Klinedinst NJ, Kerns SL, Hardy SJ, Inglis JE, Padula GDA, Mustian KM, Janelsins MC, Dorsey SG, Saligan LN, Peppone LJ

Exploratory Analysis of Associations Between Whole Blood Mitochondrial Gene Expression and Cancer-Related Fatigue Among Breast Cancer Survivors, Nursing research. 2022 Apr 13

Bajracharya R, Guralnik JM, Shardell MD, Rathbun AM, Yamashita T, Hochberg MC, Gruber-Baldini AL, Magaziner JS, Orwig DL

Long-term sex differences in all-cause and infection-specific mortality post hip fracture, Journal of the American Geriatrics Society. 2022 Apr 12

Grant-Beurmann S, Jumare J, Ndembi N, Matthew O, Shutt A, Omoigberale A, Martin OA, Fraser CM, Charurat M

Dynamics of the infant gut microbiota in the first 18 months of life: the impact of maternal HIV infection and breastfeeding, Microbiome. 2022 Apr 12

Mudrik L, Arie IG, Amir Y, Shir Y, Hieronymi P, Maoz U, O'Connor T, Schurger A, Vargas M, Vierkant T, Sinnott-Armstrong W, Roskies A

Free will without consciousness?, Trends in cognitive sciences. 2022 Apr 12

Li Q, Chen S, Zhu K, Huang X, Huang Y, Shen Z, Ding S, Gu D, Yang Q, Sun H, Hu F, Wang H, Cai J, Ma B, Zhang R, Shen J

Collateral sensitivity to pleuromutilins in vancomycin-resistant Enterococcus faecium, Nature communications. 2022 Apr 07

Neuwald AF, Yang H, Tracy Nixon B

SPARC: Structural properties associated with residue constraints, Computational and structural biotechnology journal. 2022 Apr 07

Verhoeve VI, Brammer JA, Driscoll TP, Kambouris AR, Rasko DA, Cross AS, Gillespie JJ

Genome Sequencing of Pseudomonas aeruginosa strain M2 illuminates traits of an opportunistic pathogen of burn wounds, G3 (Bethesda, Md.). 2022 Mar 28

Podlesny D, Arze C, Dörner E, Verma S, Dutta S, Walter J, Fricke WF

Metagenomic strain detection with SameStr: identification of a persisting core gut microbiota transferable by fecal transplantation, Microbiome. 2022 Mar 25

Bakken TE, Jorstad NL, Hu Q, Lake BB, Tian W, Kalmbach BE, Crow M, Hodge RD, Krienen FM, Sorensen SA, Eggermont J, Yao Z, Aevermann BD, Aldridge AI, Bartlett A, Bertagnolli D, Casper T, Castanon RG, Crichton K, Daigle TL, Dalley R, Dee N, Dembrow N, Diep D, Ding SL, Dong W, Fang R, Fischer S, Goldman M, Goldy J, Graybuck LT, Herb BR, Hou X, Kancherla J, Kroll M, Lathia K, van Lew B, Li YE, Liu CS, Liu H, Lucero JD, Mahurkar A, McMillen D, Miller JA, Moussa M, Nery JR, Nicovich PR, Niu SY, Orvis J, Osteen JK, Owen S, Palmer CR, Pham T, Plongthongkum N, Poirion O, Reed NM, Rimorin C, Rivkin A, Romanow WJ, Sedeño-Cortés AE, Siletti K, Somasundaram S, Sulc J, Tieu M, Torkelson A, Tung H, Wang X, Xie F, Yanny AM, Zhang R, Ament SA, Behrens MM, Bravo HC, Chun J, Dobin A, Gillis J, Hertzano R, Hof PR, Höllt T, Horwitz GD, Keene CD, Kharchenko PV, Ko AL, Lelieveldt BP, Luo C, Mukamel EA, Pinto-Duarte A, Preiss S, Regev A, Ren B, Scheuermann RH, Smith K, Spain WJ, White OR, Koch C, Hawrylycz M, Tasic B, Macosko EZ, McCarroll SA, Ting JT, Zeng H, Zhang K, Feng G, Ecker JR, Linnarsson S, Lein ES

Author Correction: Comparative cellular analysis of motor cortex in human, marmoset and mouse, Nature. 2022 Mar 22

Breazeale S, Conley S, Jeon S, Dorsey SG, Kearney J, Yoo B, Redeker NS

Symptom cluster profiles following traumatic orthopaedic injuries, Injury. 2022 Mar 22

Deng B, Ma B, Ma Y, Cao P, Leng X, Huang P, Zhao Y, Ji T, Lu X, Liu L

Doxorubicin and CpG loaded liposomal spherical nucleic acid for enhanced Cancer treatment, Journal of nanobiotechnology. 2022 Mar 18

Lee SY, Lee CM, Ma B, Kamle S, Elias JA, Zhou Y, Lee CG

Targeting Chitinase 1 and Chitinase 3-Like 1 as Novel Therapeutic Strategy of Pulmonary Fibrosis, Frontiers in pharmacology. 2022 Mar 17

Boonstra FM, Clough M, Strik M, van der Walt A, Butzkueven H, White OB, Law M, Fielding J, Kolbe SC

Longitudinal tracking of axonal loss using diffusion magnetic resonance imaging in multiple sclerosis, Brain communications. 2022 Mar 17

Klinedinst NJ, Huang W, Nelson AK, Resnick B, Renn C, Kane MA, Dorsey SG

Inflammatory and Immune Protein Pathways Possible Mechanisms for Pain Following Walking in Knee Osteoarthritis, Nursing research. 2022 Mar 17

Shao S, Ma B, Ai L, Tian X, Zhang L

Foliar Spraying of Selenium Combined with Biochar Alleviates Cadmium Toxicity in Peanuts and Enriches Selenium in Peanut Grains, International journal of environmental research and public health. 2022 Mar 16

Lin M, Paul R, Shapiro SZ, Doulgeris J, O'Connor TE, Tsai CT, Vrionis FD

Biomechanical Study of Cervical Endplate Removal on Subsidence and Migration in Multilevel Anterior Cervical Discectomy and Fusion, Asian spine journal. 2022 Mar 11

Chapoval SP, Lee M, Lemmer A, Ajayi O, Qi X, Neuwald AF, Keegan AD

Identifying Function Determining Residues in Neuroimmune Semaphorin 4A, International journal of molecular sciences. 2022 Mar 11

Moreira RG, Saraiva-Duarte JM, Pereira AC, Sosa-Macias M, Galaviz-Hernandez C, Santolalla ML, Magalhães WCS, Zolini C, Leal TP, Balázs Z, Llerena A, Gilman RH, Mill JG, Borda V, Guio H, O'Connor TD, Tarazona-Santos E, Rodrigues-Soares F

Population genetics of PDE4B (Phosphodiesterase-4B) in neglected native americans: implications for cancer pharmacogenetics, Clinical and translational science. 2022 Mar 10

Thurman AR, Ravel J, Gajer P, Marzinke MA, Ouattara LA, Jacot T, Peet MM, Clark MR, Doncel GF

Vaginal Microbiota and Mucosal Pharmacokinetics of Tenofovir in Healthy Women Using a 90-Day Tenofovir/Levonorgestrel Vaginal Ring, Frontiers in cellular and infection microbiology. 2022 Mar 08

France M, Alizadeh M, Brown S, Ma B, Ravel J

Towards a deeper understanding of the vaginal microbiota, Nature microbiology. 2022 Mar 04

Hertzano R, Mahurkar A

Advancing discovery in hearing research via biologist-friendly access to multi-omic data, Human genetics. 2022 Mar 02

France MT, Fu L, Rutt L, Yang H, Humphrys MS, Narina S, Gajer PM, Ma B, Forney LJ, Ravel J

Insight into the ecology of vaginal bacteria through integrative analyses of metagenomic and metatranscriptomic data, Genome biology. 2022 Mar 01

Chung KH, Park SB, Streckmann F, Wiskemann J, Mohile N, Kleckner AS, Colloca L, Dorsey SG, Kleckner IR

Mechanisms, Mediators, and Moderators of the Effects of Exercise on Chemotherapy-Induced Peripheral Neuropathy, Cancers. 2022 Feb 26

Mao JZ, Soliman MAR, Karamian BA, Khan A, Fritz AG, Avasthi N, DiMaria S, Levy BR, O'Connor TE, Schroeder G, Pollina J, Vaccaro AR, Mullin JP

Anatomical and Technical Considerations of Robot-Assisted Cervical Pedicle Screw Placement: A Cadaveric Study, Global spine journal. 2022 Feb 23

Lemme-Dumit JM, Song Y, Lwin HW, Hernandez-Chavez C, Sundararajan S, Viscardi RM, Ravel J, Pasetti MF, Ma B

Altered Gut Microbiome and Fecal Immune Phenotype in Early Preterm Infants With Leaky Gut, Frontiers in immunology. 2022 Feb 23

Sidiropoulos DN, Rafie CI, Jang JK, Castanon S, Baugh AG, Gonzalez E, Christmas BJ, Narumi VH, Davis-Marcisak EF, Sharma G, Bigelow E, Vaghasia A, Gupta A, Skaist A, Considine M, Wheelan SJ, Ganesan SK, Yu M, Yegnasubramanian S, Stearns V, Connolly RM, Gaykalova DA, Kagohara LT, Jaffee EM, Fertig EJ, Roussos Torres ET

Entinostat decreases immune suppression to promote anti-tumor responses in a HER2+ breast tumor microenvironment, Cancer immunology research. 2022 Feb 21

Wang Y, Wang D, Kang X, Ma Z, Ma Y, Hu X, Ma B, He X, Wang S, Gao B

Postoperative changes in rib cage deviation in adolescent idiopathic scoliosis, Journal of back and musculoskeletal rehabilitation. 2022 Feb 18

Chilton FH, Manichaikul A, Yang C, O'Connor TD, Johnstone LM, Blomquist S, Schembre SM, Sergeant S, Zec M, Tsai MY, Rich SS, Bridgewater SJ, Mathias RA, Hallmark B

Interpreting Clinical Trials With Omega-3 Supplements in the Context of Ancestry and Genetic Variation, Frontiers in nutrition. 2022 Feb 08

Bengtsson RJ, Simpkin AJ, Pulford CV, Low R, Rasko DA, Rigden DJ, Hall N, Barry EM, Tennant SM, Baker KS

Pathogenomic analyses of Shigella isolates inform factors limiting shigellosis prevention and control across LMICs, Nature microbiology. 2022 Jan 31

Weaver KR, Griffioen MA, Klinedinst NJ, Galik E, Duarte AC, Colloca L, Resnick B, Dorsey SG, Renn CL

Quantitative Sensory Testing Across Chronic Pain Conditions and Use in Special Populations, Frontiers in pain research (Lausanne, Switzerland). 2022 Jan 28

Kamle S, Ma B, Lee CM, Schor G, Lee CG, Elias JA

Host Chitinase 3-like-1 is a Universal Therapeutic Target for the Delta, Omicron and Other SARS-CoV-2 Viral Variants in COVID 19, bioRxiv : the preprint server for biology. 2022 Jan 24

Krakowsky Y, Potter E, Hallarn J, Monari B, Wilcox H, Bauer G, Ravel J, Prodger JL

The Effect of Gender-Affirming Medical Care on the Vaginal and Neovaginal Microbiomes of Transgender and Gender-Diverse People, Frontiers in cellular and infection microbiology. 2022 Jan 21

Ferreira CST, Marconi C, Parada CMGL, Ravel J, da Silva MG

Sialidase Activity in the Cervicovaginal Fluid Is Associated With Changes in Bacterial Components of -Deprived Microbiota, Frontiers in cellular and infection microbiology. 2022 Jan 13

Ding J, Ma B, Wei X, Li Y

Detection of by 16S Ribosomal RNA Gene PCR and Metagenomic Next-Generation Sequencing (mNGS), Frontiers in cellular and infection microbiology. 2022 Jan 07

Zhou AE, Shah ZV, Bradwell KR, Munro JB, Berry AA, Serre D, Takala-Harrison S, O'Connor TD, Silva JC, Travassos MA

STRIDE: a command-line HMM-based identifier and sub-classifier of Plasmodium falciparum RIFIN and STEVOR variant surface antigen families, BMC bioinformatics. 2022 Jan 06

Erbe R, Gore J, Gemmill K, Gaykalova DA, Fertig EJ

The use of machine learning to discover regulatory networks controlling biological systems, Molecular cell. 2022 Jan 04

Toshchakov VY, Neuwald AF

Correction to: A survey of TIR domain sequence and structure divergence, Immunogenetics. 2022 Jan 03