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Publications - Publications 2011
Differences in genotype and virulence among four multidrug-resistant Streptococcus pneumoniae isolates belonging to the PMEN1 clone, PloS one. 2011 Dec 19
The polysaccharide fraction of Propionibacterium acnes modulates the development of experimental focal segmental glomerulosclerosis, Immunobiology. 2011 Dec 16
A pilot study of host genetic variants associated with influenza-associated deaths among children and young adults, Emerging infectious diseases. 2011 Dec 16
Seroprevalence of Toxoplasma gondii in Domestic and Wild Animals From the Fernando De Noronha, Brazil, The Journal of parasitology. 2011 Dec 12
Streptococcus pneumoniae in biofilms are unable to cause invasive disease due to altered virulence determinant production, PloS one. 2011 Dec 08
Vaginal microbiome and sexually transmitted infections: an epidemiologic perspective, The Journal of clinical investigation. 2011 Dec 01
Genomic anatomy of Escherichia coli O157:H7 outbreaks, Proceedings of the National Academy of Sciences of the United States of America. 2011 Nov 30
Causes of Blindness and Visual Impairment in Latin America, Survey of ophthalmology. 2011 Nov 30
Moving pictures of the human microbiome, Genome biology. 2011 Nov 29
Genetic epidemiology with a capital E, ten years after, Genetic epidemiology. 2011 Nov 29
Whole-genome sequences of two Borrelia afzelii and two Borrelia garinii Lyme disease agent isolates, Journal of bacteriology. 2011 Nov 29
Complex microbiome underlying secondary and primary metabolism in the tunicate-Prochloron symbiosis, Proceedings of the National Academy of Sciences of the United States of America. 2011 Nov 28
Strategies for metagenomic-guided whole-community proteomics of complex microbial environments, PloS one. 2011 Nov 23
FERM domain interaction with myosin negatively regulates FAK in cardiomyocyte hypertrophy, Nature chemical biology. 2011 Nov 20
The importance of a multifaceted approach to characterizing the microbial flora of chronic wounds, Wound repair and regeneration : official publication of the Wound Healing Society [and] the European Tissue Repair Society. 2011 Nov 18
Beyond Base Pairs to Bedside: A Population Perspective on How Genomics Can Improve Health, American journal of public health. 2011 Nov 17
The Aspergillus Genome Database (AspGD): recent developments in comprehensive multispecies curation, comparative genomics and community resources, Nucleic acids research. 2011 Nov 12
Disease Ontology: a backbone for disease semantic integration, Nucleic acids research. 2011 Nov 12
Reprogramming capacity of Nanog is functionally conserved in vertebrates and resides in a unique homeodomain, Development (Cambridge, England). 2011 Oct 26
Resources and costs for microbial sequence analysis evaluated using virtual machines and cloud computing, PloS one. 2011 Oct 19
Central domain deletions affect the SAXS solution structure and function of yeast Hsp40 proteins Sis1 and Ydj1, BMC structural biology. 2011 Oct 19
Do gender inequities exist in cataract surgical coverage? Meta-analysis in Latin America, Clinical & experimental ophthalmology. 2011 Oct 17
Ubiquitin ligase substrate identification through quantitative proteomics at both the protein and peptide levels, The Journal of biological chemistry. 2011 Oct 10
Sparse distance-based learning for simultaneous multiclass classification and feature selection of metagenomic data, Bioinformatics (Oxford, England). 2011 Oct 07
Robust utilization of phospholipase-generated metabolites, glycerophosphodiesters, by Candida albicans: role of the CaGit1 permease, Eukaryotic cell. 2011 Oct 07
Hfq virulence regulation in enterohemorrhagic Escherichia coli O157:H7 strain 86-24, Journal of bacteriology. 2011 Oct 07
Is there a need for PGxceptionalism?, Genetics in medicine : official journal of the American College of Medical Genetics. 2011 Oct 07
Complicated transcatheter closure of postinfarction ventricular acute septal defect, The Journal of invasive cardiology. 2011 Oct 05
BioCreative III interactive task: an overview, BMC bioinformatics. 2011 Oct 03
Solving the Problem: Genome Annotation Standards before the Data Deluge, Standards in genomic sciences. 2011 Oct 01
Comparative study of the areas of osteochondral defects produced in the femoral condyles of rabbits treated with gel of sugarcane biopolymer, Acta cirúrgica brasileira / Sociedade Brasileira para Desenvolvimento Pesquisa em Cirurgia. 2011 Sep 29
Biosynthesis of the Apoptolidins in Nocardiopsis sp. FU 40, Tetrahedron. 2011 Sep 27
Whole-genome association study on tissue tropism phenotypes in group A Streptococcus, Journal of bacteriology. 2011 Sep 23
Evaluation of a transposase protocol for rapid generation of shotgun high-throughput sequencing libraries from nanogram quantities of DNA, Applied and environmental microbiology. 2011 Sep 23
Impacts of poultry house environment on poultry litter bacterial community composition, PloS one. 2011 Sep 16
C-H bond activation of methane in aqueous solution: a hybrid quantum mechanical/effective fragment potential study, Journal of computational chemistry. 2011 Sep 15
High prevalence of chronic pelvic pain in women in Ribeirão Preto, Brazil and direct association with abdominal surgery, Clinics (São Paulo, Brazil). 2011 Sep 14
Study on the effects of intermolecular interactions on firefly multicolor bioluminescence, Chemphyschem : a European journal of chemical physics and physical chemistry. 2011 Sep 14
Phylogeography and molecular epidemiology of Yersinia pestis in Madagascar, PLoS neglected tropical diseases. 2011 Sep 13
Pervasive recombination and sympatric genome diversification driven by frequency-dependent selection in Borrelia burgdorferi, the Lyme disease bacterium, Genetics. 2011 Sep 02
CloVR: a virtual machine for automated and portable sequence analysis from the desktop using cloud computing, BMC bioinformatics. 2011 Aug 30
Cardiovascular responses to different stages of restorative dental treatment unaffected by local anaesthetic type, Australian dental journal. 2011 Aug 11
Meeting report: mode(s) of action of asbestos and related mineral fibers, Environmental health perspectives. 2011 Aug 01
Origins of the E. coli strain causing an outbreak of hemolytic-uremic syndrome in Germany, The New England journal of medicine. 2011 Jul 27
Ribonucleotide reductase as a target to control apicomplexan diseases, Current issues in molecular biology. 2011 Jul 26
[Control of visceral leishmaniasis in the town of Porteirinha, state of Minas Gerais, Brazil, from 1998 to 2003], Revista da Sociedade Brasileira de Medicina Tropical. 2011 Jul 22
Cognitive and neuroimaging profile of a Brazilian family with CADASIL, Arquivos de neuro-psiquiatria. 2011 Jul 14
Sodium and potassium intake and mortality among US adults: prospective data from the Third National Health and Nutrition Examination Survey, Archives of internal medicine. 2011 Jul 12
Genome sequence of Ruegeria sp. strain KLH11, an N-acylhomoserine lactone-producing bacterium isolated from the marine sponge Mycale laxissima, Journal of bacteriology. 2011 Jul 08
Castor bean organelle genome sequencing and worldwide genetic diversity analysis, PloS one. 2011 Jul 07
River blindness: an old disease on the brink of elimination and control, Journal of global infectious diseases. 2011 Jul 06
Transcatheter closure of an iatrogenic aorto-right ventricular fistula, Catheterization and cardiovascular interventions : official journal of the Society for Cardiac Angiography & Interventions. 2011 Jul 06
Switching on pluripotency: a perspective on the biological requirement of Nanog, Philosophical transactions of the Royal Society of London. Series B, Biological sciences. 2011 Jul 05
Toxoplasma gondii diagnosis in ovine aborted fetuses and stillborns in the State of Pernambuco, Brazil, Veterinary parasitology. 2011 Jun 30
Improving pan-genome annotation using whole genome multiple alignment, BMC bioinformatics. 2011 Jun 30
Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications, Nature biotechnology. 2011 Jun 27
Genome sequences of the biotechnologically important Bacillus megaterium strains QM B1551 and DSM319, Journal of bacteriology. 2011 Jun 24
The Genomic Standards Consortium, PLoS biology. 2011 Jun 21
Unity in variety--the pan-genome of the Chlamydiae, Molecular biology and evolution. 2011 Jun 20
Seroprevalence of Toxoplasma gondii in free-living Amazon River dolphins (Inia geoffrensis) from central Amazon, Brazil, Veterinary parasitology. 2011 Jun 12
Strengthening the reporting of genetic risk prediction studies (GRIPS): explanation and elaboration, European journal of human genetics : EJHG. 2011 Jun 09
Genomic comparison of multi-drug resistant invasive and colonizing Acinetobacter baumannii isolated from diverse human body sites reveals genomic plasticity, BMC genomics. 2011 Jun 04
Theoretical modulation of the color of light emitted by firefly oxyluciferin, Journal of computational chemistry. 2011 Jun 02
Inhibitory control during smooth pursuit in Parkinson's disease and Huntington's disease, Movement disorders : official journal of the Movement Disorder Society. 2011 May 31
Genome sequences of the zoonotic pathogens Chlamydia psittaci 6BC and Cal10, Journal of bacteriology. 2011 May 27
GWAS Integrator: a bioinformatics tool to explore human genetic associations reported in published genome-wide association studies, European journal of human genetics : EJHG. 2011 May 25
Chemometric analysis of excitation emission matrices of fluorescent nanocomposites, Journal of fluorescence. 2011 May 24
Comparative genomics of 28 Salmonella enterica isolates: evidence for CRISPR-mediated adaptive sublineage evolution, Journal of bacteriology. 2011 May 20
Genome sequence of the obligate intracellular animal pathogen Chlamydia pecorum E58, Journal of bacteriology. 2011 May 13
Strengthening the reporting of genetic risk prediction studies (GRIPS): explanation and elaboration, European journal of epidemiology. 2011 May 06
Radicular dysfunction preponderance at early phase clinical evaluation in myelitis by Schistosoma mansoni, Arquivos de neuro-psiquiatria. 2011 May 03
Pachydermoperiostosis associated with gastric neoplasia, Revista da Associação Médica Brasileira (1992). 2011 May 03
Multiple modes of action of asbestos and related mineral fibers, Journal of toxicology and environmental health. Part B, Critical reviews. 2011 May 02
Obligate biotrophy features unraveled by the genomic analysis of rust fungi, Proceedings of the National Academy of Sciences of the United States of America. 2011 May 02
Two Theileria parva CD8 T cell antigen genes are more variable in buffalo than cattle parasites, but differ in pattern of sequence diversity, PloS one. 2011 Apr 29
The IGS Standard Operating Procedure for Automated Prokaryotic Annotation, Standards in genomic sciences. 2011 Apr 25
A case control study of anovaginal distance and bacterial vaginosis, International journal of STD & AIDS. 2011 Apr 25
Hybrid porous phosphate heterostructures as adsorbents of Hg(II) and Ni(II) from industrial sewage, Journal of hazardous materials. 2011 Apr 07
Investigating the genome diversity of B. cereus and evolutionary aspects of B. anthracis emergence, Genomics. 2011 Apr 05
Genomic Analyses of Clonal Isolates Provide Clues to the Evolution of Streptococcus pneumoniae, Frontiers in microbiology. 2011 Apr 04
Natural genetic variation caused by small insertions and deletions in the human genome, Genome research. 2011 Apr 01
Metal-enhanced photoluminescence from carbon nanodots, Chemical communications (Cambridge, England). 2011 Apr 01
Assessing the activity of cediranib, a VEGFR-2/3 tyrosine kinase inhibitor, against VEGFR-1 and members of the structurally related PDGFR family, Molecular cancer therapeutics. 2011 Mar 25
Variation in tropical reef symbiont metagenomes defined by secondary metabolism, PloS one. 2011 Mar 22
Genome signatures of Escherichia coli O157:H7 isolates from the bovine host reservoir, Applied and environmental microbiology. 2011 Mar 18
Strengthening the reporting of Genetic RIsk Prediction Studies (GRIPS): explanation and elaboration, Journal of clinical epidemiology. 2011 Mar 16
Strengthening the reporting of genetic risk prediction studies (GRIPS): explanation and elaboration, European journal of clinical investigation. 2011 Mar 15
Kinetics of inhibition of firefly luciferase by dehydroluciferyl-coenzyme A, dehydroluciferin and L-luciferin, Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology. 2011 Mar 15
FDA workshop on emerging infectious diseases: evaluating emerging infectious diseases (EIDs) for transfusion safety, Transfusion. 2011 Mar 10
Anomalous origin of the left coronary artery from the pulmonary artery in an asymptomatic adult, Congenital heart disease. 2011 Mar 10
Bacillus anthracis comparative genome analysis in support of the Amerithrax investigation, Proceedings of the National Academy of Sciences of the United States of America. 2011 Mar 07
Testicular traits as selection criteria for young Nellore bulls, Journal of animal science. 2011 Mar 07
Neisseria meningitidis is structured in clades associated with restriction modification systems that modulate homologous recombination, Proceedings of the National Academy of Sciences of the United States of America. 2011 Feb 28
[Parasitism due to Ascaris lumbricoides and its epidemiological characteristics among children in the State of Maranhão], Revista da Sociedade Brasileira de Medicina Tropical. 2011 Feb 22
Horizontal gene transfer between bacteria and animals, Trends in genetics : TIG. 2011 Feb 18
Elimination of neglected diseases in latin america and the Caribbean: a mapping of selected diseases, PLoS neglected tropical diseases. 2011 Feb 15
Greater disruption to control of voluntary saccades in autistic disorder than Asperger's disorder: evidence for greater cerebellar involvement in autism?, Cerebellum (London, England). 2011 Feb 14
Human Nek6 is a monomeric mostly globular kinase with an unfolded short N-terminal domain, BMC structural biology. 2011 Feb 14
Horizon scanning for new genomic tests, Genetics in medicine : official journal of the American College of Medical Genetics. 2011 Feb 04
Genomic characterization of asymptomatic Escherichia coli isolated from the neobladder, Microbiology (Reading, England). 2011 Jan 20
A review of the genotoxicity of 1,2-dichloroethane (EDC), Mutation research. 2011 Jan 19
Whole genome sequence of an unusual Borrelia burgdorferi sensu lato isolate, Journal of bacteriology. 2011 Jan 07
Towards BioDBcore: a community-defined information specification for biological databases, Database : the journal of biological databases and curation. 2011 Jan 04