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Publications - Publications 2015
Serum Antibodies to HPV16 Early Proteins Warrant Investigation as Potential Biomarkers for Risk Stratification and Recurrence of HPV-Associated Oropharyngeal Cancer, Cancer prevention research (Philadelphia, Pa.). 2015 Dec 23
Conductive Inks Based on a Lithium Titanate Nanotube Gel for High-Rate Lithium-Ion Batteries with Customized Configuration, Advanced materials (Deerfield Beach, Fla.). 2015 Dec 21
Erratum to: Type 2 immunity-dependent reduction of segmented filamentous bacteria in mice infected with the helminthic parasite Nippostrongylus brasiliensis, Microbiome. 2015 Dec 21
Lactobacillus crispatus inhibits growth of Gardnerella vaginalis and Neisseria gonorrhoeae on a porcine vaginal mucosa model, BMC microbiology. 2015 Dec 09
The microbiome quality control project: baseline study design and future directions, Genome biology. 2015 Dec 09
[Significance of extravascular lung water index, pulmonary vascular permeability index, and intrathoracic blood volume index in the differential diagnosis of burn-induced pulmonary edema], Zhonghua shao shang za zhi = Zhonghua shaoshang zazhi = Chinese journal of burns. 2015 Nov 13
Improvement of Immune Dysfunction in Dogs With Multiple Organ Dysfunction by High-volume Hemofiltration, Iranian journal of kidney diseases. 2015 Nov 10
Implementation of a Pan-Genomic Approach to Investigate Holobiont-Infecting Microbe Interaction: A Case Report of a Leukemic Patient with Invasive Mucormycosis, PloS one. 2015 Nov 10
Characteristics of Patients with Lower Extremity Trauma with Improved and Not Improved Pain During Hospitalization: A Pilot Study, Pain management nursing : official journal of the American Society of Pain Management Nurses. 2015 Nov 03
The burden and risk factors of ventriculostomy occlusion in a high-volume cerebrovascular practice: results of an ongoing prospective database, Journal of neurosurgery. 2015 Oct 30
Upregulation of long non-coding RNA TUG1 correlates with poor prognosis and disease status in osteosarcoma, Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine. 2015 Oct 25
Preparation of decellularized vascular matrix by co-crosslinking of procyanidins and glutaraldehyde, Bio-medical materials and engineering. 2015 Oct 21
RFX transcription factors are essential for hearing in mice, Nature communications. 2015 Oct 15
Enhanced Trapping of HIV-1 by Human Cervicovaginal Mucus Is Associated with Lactobacillus crispatus-Dominant Microbiota, mBio. 2015 Oct 06
Cerium oxide nanoparticle treatment ameliorates peritonitis-induced diaphragm dysfunction, International journal of nanomedicine. 2015 Oct 05
An integrated map of structural variation in 2,504 human genomes, Nature. 2015 Oct 03
Vaginal biogenic amines: biomarkers of bacterial vaginosis or precursors to vaginal dysbiosis?, Frontiers in physiology. 2015 Sep 29
Diarrhea, Bacteremia and Multiorgan Dysfunction due to an Extraintestinal Pathogenic Escherichia coli Strain with Enteropathogenic E. coli genes, Pathogens and disease. 2015 Sep 26
Cecal inoculum peritonitis: An alternative model for sepsis vascular dysfunction study, Life sciences. 2015 Sep 25
Type 2 immunity-dependent reduction of segmented filamentous bacteria in mice infected with the helminthic parasite Nippostrongylus brasiliensis, Microbiome. 2015 Sep 17
Ocular motor signatures of cognitive dysfunction in multiple sclerosis, Nature reviews. Neurology. 2015 Sep 15
One-pot synthesized hierarchical zeolite supported metal nanoparticles for highly efficient biomass conversion, Chemical communications (Cambridge, England). 2015 Sep 11
Candida albicans adapts to host copper during infection by swapping metal cofactors for superoxide dismutase, Proceedings of the National Academy of Sciences of the United States of America. 2015 Sep 08
Chiral resolution, determination of absolute configuration, and biological evaluation of (1,2-benzothiazin-4-yl)acetic acid enantiomers as aldose reductase inhibitors, Journal of enzyme inhibition and medicinal chemistry. 2015 Sep 02
Plasma Klotho and Cognitive Decline in Older Adults: Findings From the InCHIANTI Study, The journals of gerontology. Series A, Biological sciences and medical sciences. 2015 Aug 21
Collection media and delayed freezing effects on microbial composition of human stool, Microbiome. 2015 Aug 12
The placebo effect: from concepts to genes, Neuroscience. 2015 Aug 10
Advancing Symptom Science Through Use of Common Data Elements, Journal of nursing scholarship : an official publication of Sigma Theta Tau International Honor Society of Nursing / Sigma Theta Tau. 2015 Aug 06
Comparative genomics provides insight into the diversity of the attaching and effacing Escherichia coli virulence plasmids, Infection and immunity. 2015 Aug 03
The vocabulary of microbiome research: a proposal, Microbiome. 2015 Jul 30
Making inroads into improving treatment of bacterial vaginosis - striving for long-term cure, BMC infectious diseases. 2015 Jul 29
Toward a standard in structural genome annotation for prokaryotes, Standards in genomic sciences. 2015 Jul 25
Phenolic 4-hydroxy and 3,5-dihydroxy derivatives of 3-phenoxyquinoxalin-2(1H)-one as potent aldose reductase inhibitors with antioxidant activity, Bioorganic & medicinal chemistry letters. 2015 Jul 23
Erratum for Martin et al., Phylogenomic Identification of Regulatory Sequences in Bacteria: an Analysis of Statistical Power and an Application to Borrelia burgdorferi Sensu Lato, mBio. 2015 Jul 21
Nested PCR Biases in Interpreting Microbial Community Structure in 16S rRNA Gene Sequence Datasets, PloS one. 2015 Jul 21
Ionic liquid directed syntheses of water-stable Eu- and Tb-organic-frameworks for aqueous-phase detection of nitroaromatic explosives, Dalton transactions (Cambridge, England : 2003). 2015 Jul 15
Reactivity of an NHC-stabilized silylene towards ketones. Formation of silicon bis-enolates vs. bis-silylation of the C[double bond, length as m-dash]O bond, Dalton transactions (Cambridge, England : 2003). 2015 Jul 14
The Oral Bacterial Communities of Children with Well-Controlled HIV Infection and without HIV Infection, PloS one. 2015 Jul 06
The Human Phenotype Ontology: Semantic Unification of Common and Rare Disease, American journal of human genetics. 2015 Jun 25
Potential Influence of Staphylococcus aureus Clonal Complex 30 Genotype and Transcriptome on Hematogenous Infections, Open forum infectious diseases. 2015 Jun 24
Mass chemical casualties: Treatment of 41 patients with burns by anhydrous ammonia, Burns : journal of the International Society for Burn Injuries. 2015 Jun 24
The Biogeography of Putative Microbial Antibiotic Production, PloS one. 2015 Jun 23
The Disease Ontology: fostering interoperability between biological and clinical human disease-related data, Mammalian genome : official journal of the International Mammalian Genome Society. 2015 Jun 21
Penile Microbiota and Female Partner Bacterial Vaginosis in Rakai, Uganda, mBio. 2015 Jun 16
Educating future nursing scientists: Recommendations for integrating omics content in PhD programs, Nursing outlook. 2015 Jun 12
RNA-Seq analysis of isolate- and growth phase-specific differences in the global transcriptomes of enteropathogenic Escherichia coli prototype isolates, Frontiers in microbiology. 2015 Jun 12
Examination of the Enterotoxigenic Escherichia coli Population Structure during Human Infection, mBio. 2015 Jun 09
The Interplay of Genetics, Behavior, and Pain with Depressive Symptoms in the Elderly, The Gerontologist. 2015 Jun 09
Phylogenetically typing bacterial strains from partial SNP genotypes observed from direct sequencing of clinical specimen metagenomic data, Genome medicine. 2015 Jun 09
Pulmonary Nontuberculous Mycobacterial Infection: A Multisystem Multigenic Disease, American journal of respiratory and critical care medicine. 2015 Jun 03
Investigation of the association between the fecal microbiota and breast cancer in postmenopausal women: a population-based case-control pilot study, Journal of the National Cancer Institute. 2015 Jun 01
Complete Genome Sequence of ER2796, a DNA Methyltransferase-Deficient Strain of Escherichia coli K-12, PloS one. 2015 May 26
Bacterial Factors Associated with Lethal Outcome of Enteropathogenic Escherichia coli Infection: Genomic Case-Control Studies, PLoS neglected tropical diseases. 2015 May 15
Nurse-Enhanced Computerized Cognitive Training Increases Serum Brain-Derived Neurotrophic Factor Levels and Improves Working Memory in Heart Failure, Journal of cardiac failure. 2015 May 13
Microbiota-implications for immunity and transplantation, Nature reviews. Nephrology. 2015 May 12
Characterization of the pathogenome and phylogenomic classification of enteropathogenic Escherichia coli of the O157:non-H7 serotypes, Pathogens and disease. 2015 May 10
The Confidence Information Ontology: a step towards a standard for asserting confidence in annotations, Database : the journal of biological databases and curation. 2015 May 09
Uniform Microparticles with Controllable Highly-Interconnected Hierarchical Porous Structures, ACS applied materials & interfaces. 2015 Apr 29
Associations between CLCNKA_B tag SNPs with essential hypertension and interactions between genetic and environmental factors in an island population in China, Clinical and experimental hypertension (New York, N.Y. : 1993). 2015 Apr 28
RNA-Seq Analysis of the Host Response to Staphylococcus aureus Skin and Soft Tissue Infection in a Mouse Model, PloS one. 2015 Apr 22
Transcriptomic Analysis of Vulvovaginal Candidiasis Identifies a Role for the NLRP3 Inflammasome, mBio. 2015 Apr 21
Integrated compensatory network is activated in the absence of NCC phosphorylation, The Journal of clinical investigation. 2015 Apr 20
Fecal Microbiota Characteristics of Patients with Colorectal Adenoma Detected by Screening: A Population-based Study, EBioMedicine. 2015 Apr 18
Functional Dynamics of the Gut Microbiome in Elderly People during Probiotic Consumption, mBio. 2015 Apr 14
Phylogenomic Identification of Regulatory Sequences in Bacteria: an Analysis of Statistical Power and an Application to Borrelia burgdorferi Sensu Lato, mBio. 2015 Apr 14
Correction: HP1β Is a Biomarker for Breast Cancer Prognosis and PARP Inhibitor Therapy, PloS one. 2015 Apr 13
New signaling pathways govern the host response to C. albicans infection in various niches, Genome research. 2015 Apr 09
The genome sequence of four isolates from the family Lichtheimiaceae, Pathogens and disease. 2015 Apr 09
Generating a focused view of disease ontology cancer terms for pan-cancer data integration and analysis, Database : the journal of biological databases and curation. 2015 Apr 04
Prediction of all-cause mortality with copeptin in cardio-cerebrovascular patients: A meta-analysis of prospective studies, Peptides. 2015 Apr 04
Brain feminization requires active repression of masculinization via DNA methylation, Nature neuroscience. 2015 Mar 30
The Impact of Genetics on Physical Resilience and Successful Aging, Journal of aging and health. 2015 Mar 27
Multi-Site Clinical Evaluation of DW-MRI as a Treatment Response Metric for Breast Cancer Patients Undergoing Neoadjuvant Chemotherapy, PloS one. 2015 Mar 27
Insights into the environmental reservoir of pathogenic Vibrio parahaemolyticus using comparative genomics, Frontiers in microbiology. 2015 Mar 24
SINC, a type III secreted protein of Chlamydia psittaci, targets the inner nuclear membrane of infected cells and uninfected neighbors, Molecular biology of the cell. 2015 Mar 18
Fine-scale analysis of 16S rRNA sequences reveals a high level of taxonomic diversity among vaginal Atopobium spp, Pathogens and disease. 2015 Mar 15
Gut Microbiota in Multiple Sclerosis: Possible Influence of Immunomodulators, Journal of investigative medicine : the official publication of the American Federation for Clinical Research. 2015 Mar 14
HP1β Is a Biomarker for Breast Cancer Prognosis and PARP Inhibitor Therapy, PloS one. 2015 Mar 13
Chlamydia caviae infection alters abundance but not composition of the guinea pig vaginal microbiota, Pathogens and disease. 2015 Mar 10
Evaluation of dynamic weight bearing for measuring nonevoked inflammatory hyperalgesia in mice, Nursing research. 2015 Mar 05
Microbial diversity and the presence of algae in halite endolithic communities are correlated to atmospheric moisture in the hyper-arid zone of the Atacama Desert, Environmental microbiology. 2015 Mar 02
Reviewer acknowledgment 2014, Microbiome. 2015 Feb 21
Transcriptional Attenuation Controls Macrolide Inducible Efflux and Resistance in Streptococcus pneumoniae and in Other Gram-Positive Bacteria Containing mef/mel(msr(D)) Elements, PloS one. 2015 Feb 19
The Vaginal Microbiota over an 8- to 10-Year Period in a Cohort of HIV-Infected and HIV-Uninfected Women, PloS one. 2015 Feb 12
AdmixKJump: identifying population structure in recently diverged groups, Source code for biology and medicine. 2015 Feb 03
Procyanidins-crosslinked aortic elastin scaffolds with distinctive anti-calcification and biological properties, Acta biomaterialia. 2015 Jan 30
Chitinase 3-like-1 Regulates both Visceral Fat Accumulation and Asthma-like Th2 Inflammation, American journal of respiratory and critical care medicine. 2015 Jan 28
Conservation and Immunogenicity of Novel Antigens in Diverse Isolates of Enterotoxigenic Escherichia coli, PLoS neglected tropical diseases. 2015 Jan 28
Blocking Yersiniabactin Import Attenuates Extraintestinal Pathogenic Escherichia coli in Cystitis and Pyelonephritis and Represents a Novel Target to Prevent Urinary Tract Infection, Infection and immunity. 2015 Jan 26
Uncovering effects of antibiotics on the host and microbiota using transkingdom gene networks, Gut. 2015 Jan 22
Design and synthesis of potent and multifunctional aldose reductase inhibitors based on quinoxalinones, Journal of medicinal chemistry. 2015 Jan 20
Defining the phylogenomics of Shigella species: A pathway to diagnostics, Journal of clinical microbiology. 2015 Jan 14
Job security and work performance in Chinese employees: The mediating role of organisational identification, International journal of psychology : Journal international de psychologie. 2015 Jan 12